HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:78.4 nTPM
HPA:78.4 nTPM
GTEx:57.7 nTPM
FANTOM5:117.1 Scaled Tags Per Million
Pig:73.9 nTPM
Mouse:178.2 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.4
Sample id Sample description nTPM
Hippocampus
nTPM: 63.9
1855 Male, age 76, left hemisphere 78.1
1898 Male, age 80, left hemisphere 77.2
2148 Female, age 91, left hemisphere 73.0
1911 Female, age 85, right hemisphere 57.0
2621 Female, age 67, right hemisphere 57.0
2529 Female, age 94, left hemisphere 41.1
Dentate gyrus
nTPM: 62.7
2010 Male, age 76, both hemispheres 80.3
1927 Female, age 91, both hemispheres 78.0
2531 Female, age 67, both hemispheres 61.9
2530 Female, age 94, left hemisphere 61.1
2246 Female, age 85, both hemispheres 55.7
2528 Male, age 74, both hemispheres 38.9
Entorhinal gyrus
nTPM: 34.8
1938 Female, age 85, left hemisphere 41.7
2686 Male, age 75, right hemisphere 37.7
2764 Male, age 80, right hemisphere 34.8
2613 Female, age 94, left hemisphere 33.4
2117 Female, age 91, right hemisphere 31.5
1787 Male, age 76, left hemisphere 30.0
Hippocampus, CA1
nTPM: 78.4
2749 Male, age 80, left hemisphere 125.6
2045 Male, age 76, both hemispheres 113.0
1873 Female, age 85, both hemispheres 81.2
2527 Male, age 74, both hemispheres 38.5
2082 Female, age 91, right hemisphere 33.6
Hippocampus, CA2
nTPM: 52.8
1963 Male, age 80, left hemisphere 90.7
1892 Male, age 76, both hemispheres 82.0
2437 Female, age 94, left hemisphere 39.3
1940 Female, age 85, left hemisphere 37.1
2113 Female, age 91, right hemisphere 35.8
2249 Male, age 74, both hemispheres 31.6
Hippocampus, CA3
nTPM: 64.7
2137 Male, age 80, left hemisphere 105.7
2620 Female, age 94, left hemisphere 74.0
1867 Male, age 76, both hemispheres 67.4
2861 Female, age 67, both hemispheres 54.3
1891 Female, age 85, both hemispheres 53.4
2436 Male, age 74, both hemispheres 33.7
Parahippocampal cortex
nTPM: 34.8
2018 Male, age 76, both hemispheres 45.5
1850 Male, age 80, both hemispheres 44.4
1933 Female, age 85, both hemispheres 37.2
2245 Female, age 91, both hemispheres 36.6
2532 Female, age 72, left hemisphere 36.5
2693 Female, age 94, both hemispheres 32.4
1990 Female, age 91, right hemisphere 29.6
2692 Male, age 74, both hemispheres 29.5
2250 Female, age 67, right hemisphere 29.0
2622 Female, age 67, right hemisphere 27.3
Perirhinal gyrus
nTPM: 38.9
1794 Male, age 80, right hemisphere 45.0
1841 Female, age 85, right hemisphere 41.4
2848 Male, age 76, right hemisphere 36.8
1847 Female, age 91, left hemisphere 36.7
2521 Female, age 94, right hemisphere 34.7
Subiculum
nTPM: 40.8
1901 Male, age 80, both hemispheres 57.9
2042 Male, age 76, both hemispheres 45.5
2729 Female, age 91, right hemisphere 44.6
2438 Female, age 94, left hemisphere 38.0
1977 Female, age 85, both hemispheres 35.0
2619 Male, age 74, both hemispheres 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.7
Samples: 197

Max nTPM: 198.6
Min nTPM: 8.9
Std nTPM: 24.9
Median nTPM: 53.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 198.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 134.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 133.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 133.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 126.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 122.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 121.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 117.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 108.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 107.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 106.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.1
FF:10169-103B7 60 years, female 154.8
FF:10153-102I9 76 years, female 79.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.0
Samples: 4

Max nTPM: 97.2
Min nTPM: 38.7
Sample A Female 97.2
Sample B Female 82.1
Sample C Male 38.7
Sample D Male 77.8
Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 55.9
Min nTPM: 38.0
Sample A Female 45.1
Sample B Female 55.9
Sample C Male 42.8
Sample D Male 38.0
Subiculum
nTPM: 33.6
Samples: 4

Max nTPM: 40.9
Min nTPM: 27.0
Sample A Female 40.9
Sample B Female 32.9
Sample C Male 27.0
Sample D Male 33.7
Ventral hippocampus
nTPM: 55.6
Samples: 4

Max nTPM: 69.9
Min nTPM: 40.4
Sample A Female 69.9
Sample B Female 40.4
Sample C Male 46.3
Sample D Male 65.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 178.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.8
Samples: 4

Max nTPM: 109.5
Min nTPM: 90.3
Sample A Male 99.0
Sample B Male 92.4
Sample C Female 109.5
Sample D Female 90.3
Hippocampal formation
nTPM: 178.2
Samples: 4

Max nTPM: 220.4
Min nTPM: 149.1
Sample A Male 149.1
Sample B Male 189.8
Sample C Female 220.4
Sample D Female 153.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
73584837 Antisense, RP_051206_01_C05, Mouse strain C57BL/6J (56 days, male) 14.9

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