HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:72.6 nTPM
HPA:72.6 nTPM
GTEx:70.1 nTPM
FANTOM5:66.9 Scaled Tags Per Million
Pig:60.5 nTPM
Mouse:122.3 nTPM
Allen mouse:16.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.6
Sample id Sample description nTPM
Hippocampus
nTPM: 66.8
1898 Male, age 80, left hemisphere 79.4
2529 Female, age 94, left hemisphere 67.8
1911 Female, age 85, right hemisphere 64.2
2148 Female, age 91, left hemisphere 63.5
1855 Male, age 76, left hemisphere 63.4
2621 Female, age 67, right hemisphere 62.7
Dentate gyrus
nTPM: 68.1
2530 Female, age 94, left hemisphere 84.1
2528 Male, age 74, both hemispheres 71.7
2010 Male, age 76, both hemispheres 70.2
1927 Female, age 91, both hemispheres 66.0
2246 Female, age 85, both hemispheres 61.7
2531 Female, age 67, both hemispheres 54.6
Entorhinal gyrus
nTPM: 71.6
2764 Male, age 80, right hemisphere 84.8
2117 Female, age 91, right hemisphere 77.2
1787 Male, age 76, left hemisphere 72.5
1938 Female, age 85, left hemisphere 70.1
2613 Female, age 94, left hemisphere 67.0
2686 Male, age 75, right hemisphere 58.1
Hippocampus, CA1
nTPM: 70.4
2749 Male, age 80, left hemisphere 91.3
2527 Male, age 74, both hemispheres 78.9
2082 Female, age 91, right hemisphere 63.0
1873 Female, age 85, both hemispheres 62.7
2045 Male, age 76, both hemispheres 56.2
Hippocampus, CA2
nTPM: 72.6
2249 Male, age 74, both hemispheres 87.3
1963 Male, age 80, left hemisphere 84.7
2437 Female, age 94, left hemisphere 68.4
1892 Male, age 76, both hemispheres 68.1
1940 Female, age 85, left hemisphere 64.5
2113 Female, age 91, right hemisphere 62.8
Hippocampus, CA3
nTPM: 65.9
2436 Male, age 74, both hemispheres 79.4
2137 Male, age 80, left hemisphere 70.6
1867 Male, age 76, both hemispheres 67.8
2620 Female, age 94, left hemisphere 63.7
1891 Female, age 85, both hemispheres 63.2
2861 Female, age 67, both hemispheres 50.8
Parahippocampal cortex
nTPM: 62.6
1990 Female, age 91, right hemisphere 73.4
2532 Female, age 72, left hemisphere 69.2
1933 Female, age 85, both hemispheres 68.4
2245 Female, age 91, both hemispheres 66.0
1850 Male, age 80, both hemispheres 65.6
2250 Female, age 67, right hemisphere 63.9
2018 Male, age 76, both hemispheres 61.8
2692 Male, age 74, both hemispheres 56.6
2693 Female, age 94, both hemispheres 52.3
2622 Female, age 67, right hemisphere 48.9
Perirhinal gyrus
nTPM: 67.4
1794 Male, age 80, right hemisphere 79.9
1847 Female, age 91, left hemisphere 75.7
2521 Female, age 94, right hemisphere 63.8
1841 Female, age 85, right hemisphere 60.0
2848 Male, age 76, right hemisphere 57.4
Subiculum
nTPM: 69.8
1901 Male, age 80, both hemispheres 80.8
1977 Female, age 85, both hemispheres 80.4
2619 Male, age 74, both hemispheres 70.6
2042 Male, age 76, both hemispheres 64.5
2729 Female, age 91, right hemisphere 62.9
2438 Female, age 94, left hemisphere 59.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.1
Samples: 197

Max nTPM: 158.4
Min nTPM: 21.6
Std nTPM: 19.9
Median nTPM: 69.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 158.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 135.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 128.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 127.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 123.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 122.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 118.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 114.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 109.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 101.6
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 100.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.9
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 61.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.5
Samples: 4

Max nTPM: 83.0
Min nTPM: 40.6
Sample A Female 83.0
Sample B Female 57.4
Sample C Male 61.1
Sample D Male 40.6
Entorhinal cortex
nTPM: 55.1
Samples: 4

Max nTPM: 65.1
Min nTPM: 43.5
Sample A Female 54.1
Sample B Female 65.1
Sample C Male 57.6
Sample D Male 43.5
Subiculum
nTPM: 48.6
Samples: 4

Max nTPM: 67.0
Min nTPM: 38.9
Sample A Female 67.0
Sample B Female 44.0
Sample C Male 44.4
Sample D Male 38.9
Ventral hippocampus
nTPM: 58.0
Samples: 4

Max nTPM: 73.9
Min nTPM: 38.1
Sample A Female 64.2
Sample B Female 38.1
Sample C Male 73.9
Sample D Male 55.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.0
Samples: 4

Max nTPM: 129.5
Min nTPM: 94.6
Sample A Male 128.7
Sample B Male 129.5
Sample C Female 115.3
Sample D Female 94.6
Hippocampal formation
nTPM: 122.3
Samples: 4

Max nTPM: 155.9
Min nTPM: 106.3
Sample A Male 106.3
Sample B Male 115.5
Sample C Female 111.6
Sample D Female 155.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.6
70526029 Antisense, RP_050317_04_H04, Mouse strain C57BL/6J (56 days, male) 16.6

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