HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:118.1 nTPM
HPA:118.1 nTPM
GTEx:95.8 nTPM
FANTOM5:89.5 Scaled Tags Per Million
Pig:43.0 nTPM
Mouse:43.4 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000835Antibody CAB032888
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 118.1
Sample id Sample description nTPM
Hippocampus
nTPM: 117.0
1855 Male, age 76, left hemisphere 125.8
1898 Male, age 80, left hemisphere 121.6
2621 Female, age 67, right hemisphere 119.2
1911 Female, age 85, right hemisphere 113.7
2529 Female, age 94, left hemisphere 112.4
2148 Female, age 91, left hemisphere 109.3
Dentate gyrus
nTPM: 111.5
2010 Male, age 76, both hemispheres 123.8
2528 Male, age 74, both hemispheres 113.1
2530 Female, age 94, left hemisphere 112.9
2246 Female, age 85, both hemispheres 110.1
1927 Female, age 91, both hemispheres 105.1
2531 Female, age 67, both hemispheres 104.2
Entorhinal gyrus
nTPM: 111.3
2117 Female, age 91, right hemisphere 130.7
1787 Male, age 76, left hemisphere 113.3
1938 Female, age 85, left hemisphere 110.6
2764 Male, age 80, right hemisphere 108.3
2686 Male, age 75, right hemisphere 103.8
2613 Female, age 94, left hemisphere 101.0
Hippocampus, CA1
nTPM: 109.2
1873 Female, age 85, both hemispheres 112.1
2045 Male, age 76, both hemispheres 111.8
2527 Male, age 74, both hemispheres 111.5
2082 Female, age 91, right hemisphere 110.0
2749 Male, age 80, left hemisphere 100.4
Hippocampus, CA2
nTPM: 117.6
2249 Male, age 74, both hemispheres 133.5
1940 Female, age 85, left hemisphere 126.0
2437 Female, age 94, left hemisphere 114.6
2113 Female, age 91, right hemisphere 112.7
1892 Male, age 76, both hemispheres 110.0
1963 Male, age 80, left hemisphere 108.6
Hippocampus, CA3
nTPM: 117.6
2436 Male, age 74, both hemispheres 176.3
1891 Female, age 85, both hemispheres 116.9
1867 Male, age 76, both hemispheres 114.4
2861 Female, age 67, both hemispheres 102.5
2620 Female, age 94, left hemisphere 98.7
2137 Male, age 80, left hemisphere 97.1
Parahippocampal cortex
nTPM: 108.9
2018 Male, age 76, both hemispheres 123.2
2250 Female, age 67, right hemisphere 112.8
1990 Female, age 91, right hemisphere 110.9
1850 Male, age 80, both hemispheres 108.9
2692 Male, age 74, both hemispheres 108.8
2245 Female, age 91, both hemispheres 106.6
1933 Female, age 85, both hemispheres 105.7
2693 Female, age 94, both hemispheres 104.8
2622 Female, age 67, right hemisphere 104.0
2532 Female, age 72, left hemisphere 103.7
Perirhinal gyrus
nTPM: 106.4
2521 Female, age 94, right hemisphere 108.9
1847 Female, age 91, left hemisphere 108.8
1841 Female, age 85, right hemisphere 106.2
2848 Male, age 76, right hemisphere 104.5
1794 Male, age 80, right hemisphere 103.5
Subiculum
nTPM: 118.1
2042 Male, age 76, both hemispheres 131.7
2729 Female, age 91, right hemisphere 122.1
2619 Male, age 74, both hemispheres 116.6
1901 Male, age 80, both hemispheres 116.0
2438 Female, age 94, left hemisphere 114.5
1977 Female, age 85, both hemispheres 107.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.8
Samples: 197

Max nTPM: 232.0
Min nTPM: 37.6
Std nTPM: 31.1
Median nTPM: 92.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 232.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 187.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 186.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 181.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 161.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 160.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 159.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 156.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 152.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 149.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 145.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.5
FF:10153-102I9 76 years, female 102.7
FF:10169-103B7 60 years, female 76.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.0
Samples: 4

Max nTPM: 70.1
Min nTPM: 21.9
Sample A Female 70.1
Sample B Female 32.0
Sample C Male 48.1
Sample D Male 21.9
Entorhinal cortex
nTPM: 30.5
Samples: 4

Max nTPM: 34.7
Min nTPM: 18.7
Sample A Female 34.3
Sample B Female 34.4
Sample C Male 34.7
Sample D Male 18.7
Subiculum
nTPM: 36.8
Samples: 4

Max nTPM: 61.8
Min nTPM: 25.7
Sample A Female 61.8
Sample B Female 32.9
Sample C Male 26.6
Sample D Male 25.7
Ventral hippocampus
nTPM: 37.5
Samples: 4

Max nTPM: 45.1
Min nTPM: 26.5
Sample A Female 44.6
Sample B Female 26.5
Sample C Male 45.1
Sample D Male 33.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.6
Samples: 4

Max nTPM: 40.3
Min nTPM: 34.0
Sample A Male 37.1
Sample B Male 34.8
Sample C Female 40.3
Sample D Female 34.0
Hippocampal formation
nTPM: 43.4
Samples: 4

Max nTPM: 50.5
Min nTPM: 35.7
Sample A Male 39.9
Sample B Male 35.7
Sample C Female 47.6
Sample D Female 50.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
75774115 Antisense, RP_060530_01_B11, Mouse strain C57BL/6J (56 days, male) 3.6
293915 Antisense, RP_040617_01_G02, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

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