HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.1 nTPM
HPA:39.1 nTPM
GTEx:31.9 nTPM
FANTOM5:122.4 Scaled Tags Per Million
Pig:86.5 nTPM
Mouse:104.0 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004802
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.1
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
1855 Male, age 76, left hemisphere 39.4
1898 Male, age 80, left hemisphere 35.5
2621 Female, age 67, right hemisphere 28.0
2148 Female, age 91, left hemisphere 25.6
2529 Female, age 94, left hemisphere 19.1
1911 Female, age 85, right hemisphere 12.5
Dentate gyrus
nTPM: 33.8
2246 Female, age 85, both hemispheres 45.2
2531 Female, age 67, both hemispheres 43.1
2010 Male, age 76, both hemispheres 37.3
2528 Male, age 74, both hemispheres 26.7
2530 Female, age 94, left hemisphere 26.2
1927 Female, age 91, both hemispheres 24.0
Entorhinal gyrus
nTPM: 11.4
1787 Male, age 76, left hemisphere 17.8
2117 Female, age 91, right hemisphere 14.0
2764 Male, age 80, right hemisphere 13.5
2686 Male, age 75, right hemisphere 9.2
1938 Female, age 85, left hemisphere 7.2
2613 Female, age 94, left hemisphere 6.5
Hippocampus, CA1
nTPM: 39.1
2082 Female, age 91, right hemisphere 70.9
2527 Male, age 74, both hemispheres 34.8
2045 Male, age 76, both hemispheres 33.2
2749 Male, age 80, left hemisphere 30.3
1873 Female, age 85, both hemispheres 26.3
Hippocampus, CA2
nTPM: 26.9
2113 Female, age 91, right hemisphere 36.3
1892 Male, age 76, both hemispheres 33.4
1940 Female, age 85, left hemisphere 29.8
1963 Male, age 80, left hemisphere 23.3
2249 Male, age 74, both hemispheres 20.7
2437 Female, age 94, left hemisphere 18.3
Hippocampus, CA3
nTPM: 27.7
2620 Female, age 94, left hemisphere 56.7
2861 Female, age 67, both hemispheres 29.3
1867 Male, age 76, both hemispheres 26.5
2436 Male, age 74, both hemispheres 22.1
1891 Female, age 85, both hemispheres 18.5
2137 Male, age 80, left hemisphere 13.3
Parahippocampal cortex
nTPM: 22.3
2018 Male, age 76, both hemispheres 41.3
2245 Female, age 91, both hemispheres 36.0
2250 Female, age 67, right hemisphere 35.1
2693 Female, age 94, both hemispheres 32.0
1933 Female, age 85, both hemispheres 20.6
2532 Female, age 72, left hemisphere 13.4
1850 Male, age 80, both hemispheres 12.9
1990 Female, age 91, right hemisphere 12.7
2622 Female, age 67, right hemisphere 11.6
2692 Male, age 74, both hemispheres 7.4
Perirhinal gyrus
nTPM: 37.9
2521 Female, age 94, right hemisphere 55.5
1794 Male, age 80, right hemisphere 45.4
1847 Female, age 91, left hemisphere 41.5
1841 Female, age 85, right hemisphere 28.0
2848 Male, age 76, right hemisphere 19.1
Subiculum
nTPM: 19.5
2729 Female, age 91, right hemisphere 30.3
1977 Female, age 85, both hemispheres 28.3
2438 Female, age 94, left hemisphere 16.1
2619 Male, age 74, both hemispheres 15.9
1901 Male, age 80, both hemispheres 14.2
2042 Male, age 76, both hemispheres 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.9
Samples: 197

Max nTPM: 125.1
Min nTPM: 3.0
Std nTPM: 22.3
Median nTPM: 27.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 125.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 101.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 100.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 89.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 86.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 82.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 81.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 79.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 78.7
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 77.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 74.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.4
FF:10169-103B7 60 years, female 193.5
FF:10153-102I9 76 years, female 51.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 37.7
Min nTPM: 14.3
Sample A Female 32.2
Sample B Female 37.7
Sample C Male 20.0
Sample D Male 14.3
Entorhinal cortex
nTPM: 86.5
Samples: 4

Max nTPM: 124.5
Min nTPM: 67.2
Sample A Female 124.5
Sample B Female 77.8
Sample C Male 76.6
Sample D Male 67.2
Subiculum
nTPM: 40.2
Samples: 4

Max nTPM: 44.3
Min nTPM: 37.3
Sample A Female 41.9
Sample B Female 37.3
Sample C Male 44.3
Sample D Male 37.3
Ventral hippocampus
nTPM: 34.3
Samples: 4

Max nTPM: 50.5
Min nTPM: 24.8
Sample A Female 25.1
Sample B Female 24.8
Sample C Male 36.8
Sample D Male 50.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.0
Samples: 4

Max nTPM: 142.9
Min nTPM: 68.0
Sample A Male 107.7
Sample B Male 142.9
Sample C Female 68.0
Sample D Female 97.4
Hippocampal formation
nTPM: 32.6
Samples: 4

Max nTPM: 47.2
Min nTPM: 25.8
Sample A Male 47.2
Sample B Male 25.8
Sample C Female 27.6
Sample D Female 29.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
70927827 Antisense, RP_050725_01_B03, Mouse strain C57BL/6J (56 days, male) 5.1
413779 Antisense, RP_040809_01_C11, Mouse strain C57BL/6J (56 days, male) 4.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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