HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.9 nTPM
HPA:71.9 nTPM
GTEx:76.7 nTPM
FANTOM5:251.2 Scaled Tags Per Million
Pig:137.6 nTPM
Mouse:132.4 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008206Antibody HPA012693
Glial cells HighHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.9
Sample id Sample description nTPM
Hippocampus
nTPM: 64.5
2529 Female, age 94, left hemisphere 69.2
2621 Female, age 67, right hemisphere 67.2
1898 Male, age 80, left hemisphere 66.8
1911 Female, age 85, right hemisphere 63.4
1855 Male, age 76, left hemisphere 61.5
2148 Female, age 91, left hemisphere 58.6
Dentate gyrus
nTPM: 59.8
2528 Male, age 74, both hemispheres 63.0
2246 Female, age 85, both hemispheres 62.3
2010 Male, age 76, both hemispheres 61.1
1927 Female, age 91, both hemispheres 59.5
2530 Female, age 94, left hemisphere 57.7
2531 Female, age 67, both hemispheres 55.0
Entorhinal gyrus
nTPM: 68.0
1938 Female, age 85, left hemisphere 74.4
2117 Female, age 91, right hemisphere 72.5
2764 Male, age 80, right hemisphere 70.1
1787 Male, age 76, left hemisphere 69.9
2613 Female, age 94, left hemisphere 64.3
2686 Male, age 75, right hemisphere 56.7
Hippocampus, CA1
nTPM: 62.6
2527 Male, age 74, both hemispheres 73.5
2749 Male, age 80, left hemisphere 63.9
1873 Female, age 85, both hemispheres 59.7
2082 Female, age 91, right hemisphere 59.1
2045 Male, age 76, both hemispheres 56.7
Hippocampus, CA2
nTPM: 64.0
2249 Male, age 74, both hemispheres 72.7
1892 Male, age 76, both hemispheres 66.6
2437 Female, age 94, left hemisphere 63.4
1940 Female, age 85, left hemisphere 61.2
2113 Female, age 91, right hemisphere 60.6
1963 Male, age 80, left hemisphere 59.4
Hippocampus, CA3
nTPM: 59.6
1891 Female, age 85, both hemispheres 67.0
2436 Male, age 74, both hemispheres 65.3
1867 Male, age 76, both hemispheres 62.4
2137 Male, age 80, left hemisphere 56.6
2620 Female, age 94, left hemisphere 55.1
2861 Female, age 67, both hemispheres 51.0
Parahippocampal cortex
nTPM: 66.5
1850 Male, age 80, both hemispheres 80.0
1990 Female, age 91, right hemisphere 72.7
2692 Male, age 74, both hemispheres 67.9
2250 Female, age 67, right hemisphere 66.9
1933 Female, age 85, both hemispheres 66.2
2693 Female, age 94, both hemispheres 65.6
2532 Female, age 72, left hemisphere 65.2
2245 Female, age 91, both hemispheres 64.0
2018 Male, age 76, both hemispheres 59.6
2622 Female, age 67, right hemisphere 57.4
Perirhinal gyrus
nTPM: 71.9
2848 Male, age 76, right hemisphere 77.0
1847 Female, age 91, left hemisphere 73.1
1794 Male, age 80, right hemisphere 71.7
1841 Female, age 85, right hemisphere 69.1
2521 Female, age 94, right hemisphere 68.5
Subiculum
nTPM: 69.8
2438 Female, age 94, left hemisphere 84.2
2619 Male, age 74, both hemispheres 71.4
1977 Female, age 85, both hemispheres 70.0
1901 Male, age 80, both hemispheres 66.6
2042 Male, age 76, both hemispheres 64.7
2729 Female, age 91, right hemisphere 61.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.7
Samples: 197

Max nTPM: 173.3
Min nTPM: 2.1
Std nTPM: 30.5
Median nTPM: 71.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 173.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 172.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 166.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 166.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 159.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 156.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 152.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 142.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 142.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 137.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 135.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 251.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 251.2
FF:10153-102I9 76 years, female 281.6
FF:10169-103B7 60 years, female 220.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 137.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 137.7
Samples: 4

Max nTPM: 200.8
Min nTPM: 75.1
Sample A Female 200.8
Sample B Female 108.7
Sample C Male 166.0
Sample D Male 75.1
Entorhinal cortex
nTPM: 119.9
Samples: 4

Max nTPM: 137.6
Min nTPM: 99.9
Sample A Female 127.9
Sample B Female 137.6
Sample C Male 114.1
Sample D Male 99.9
Subiculum
nTPM: 98.8
Samples: 4

Max nTPM: 122.0
Min nTPM: 82.4
Sample A Female 122.0
Sample B Female 87.6
Sample C Male 82.4
Sample D Male 103.0
Ventral hippocampus
nTPM: 103.0
Samples: 4

Max nTPM: 128.7
Min nTPM: 78.3
Sample A Female 128.7
Sample B Female 78.3
Sample C Male 91.3
Sample D Male 113.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.4
Samples: 4

Max nTPM: 136.7
Min nTPM: 124.2
Sample A Male 136.7
Sample B Male 134.4
Sample C Female 124.2
Sample D Female 134.3
Hippocampal formation
nTPM: 122.8
Samples: 4

Max nTPM: 133.2
Min nTPM: 110.6
Sample A Male 133.2
Sample B Male 114.9
Sample C Female 132.3
Sample D Female 110.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
2451 Antisense, RP_040526_02_D08, Mouse strain C57BL/6J (56 days, male) 8.4
2450 Antisense, RP_040526_02_D08, Mouse strain C57BL/6J (56 days, male) 7.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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