HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.1 nTPM
HPA:10.1 nTPM
GTEx:7.9 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Pig:7.3 nTPM
Mouse:27.2 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038600
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.1
Sample id Sample description nTPM
Hippocampus
nTPM: 6.9
1911 Female, age 85, right hemisphere 11.0
2621 Female, age 67, right hemisphere 7.0
2529 Female, age 94, left hemisphere 6.8
1855 Male, age 76, left hemisphere 6.2
1898 Male, age 80, left hemisphere 5.9
2148 Female, age 91, left hemisphere 4.6
Dentate gyrus
nTPM: 6.0
1927 Female, age 91, both hemispheres 9.9
2246 Female, age 85, both hemispheres 6.5
2010 Male, age 76, both hemispheres 6.4
2530 Female, age 94, left hemisphere 5.6
2528 Male, age 74, both hemispheres 3.9
2531 Female, age 67, both hemispheres 3.4
Entorhinal gyrus
nTPM: 5.9
2686 Male, age 75, right hemisphere 8.3
1938 Female, age 85, left hemisphere 7.6
1787 Male, age 76, left hemisphere 6.0
2117 Female, age 91, right hemisphere 5.2
2613 Female, age 94, left hemisphere 4.5
2764 Male, age 80, right hemisphere 3.9
Hippocampus, CA1
nTPM: 10.1
2749 Male, age 80, left hemisphere 25.7
1873 Female, age 85, both hemispheres 7.7
2527 Male, age 74, both hemispheres 6.9
2045 Male, age 76, both hemispheres 5.2
2082 Female, age 91, right hemisphere 5.0
Hippocampus, CA2
nTPM: 6.6
1963 Male, age 80, left hemisphere 9.7
1940 Female, age 85, left hemisphere 7.6
2249 Male, age 74, both hemispheres 6.8
2113 Female, age 91, right hemisphere 6.0
1892 Male, age 76, both hemispheres 5.1
2437 Female, age 94, left hemisphere 4.5
Hippocampus, CA3
nTPM: 8.5
2137 Male, age 80, left hemisphere 21.8
2436 Male, age 74, both hemispheres 8.9
1867 Male, age 76, both hemispheres 6.3
1891 Female, age 85, both hemispheres 5.9
2861 Female, age 67, both hemispheres 5.3
2620 Female, age 94, left hemisphere 3.0
Parahippocampal cortex
nTPM: 6.7
2532 Female, age 72, left hemisphere 8.3
2250 Female, age 67, right hemisphere 7.6
1850 Male, age 80, both hemispheres 7.5
2622 Female, age 67, right hemisphere 7.4
2018 Male, age 76, both hemispheres 7.2
2245 Female, age 91, both hemispheres 6.9
1933 Female, age 85, both hemispheres 6.5
1990 Female, age 91, right hemisphere 5.9
2692 Male, age 74, both hemispheres 5.3
2693 Female, age 94, both hemispheres 4.9
Perirhinal gyrus
nTPM: 7.3
1841 Female, age 85, right hemisphere 12.5
1794 Male, age 80, right hemisphere 7.0
1847 Female, age 91, left hemisphere 6.5
2848 Male, age 76, right hemisphere 6.3
2521 Female, age 94, right hemisphere 4.1
Subiculum
nTPM: 6.3
1901 Male, age 80, both hemispheres 9.0
2042 Male, age 76, both hemispheres 8.0
2438 Female, age 94, left hemisphere 5.6
1977 Female, age 85, both hemispheres 5.2
2619 Male, age 74, both hemispheres 5.1
2729 Female, age 91, right hemisphere 4.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.9
Samples: 197

Max nTPM: 29.5
Min nTPM: 1.5
Std nTPM: 5.0
Median nTPM: 6.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 29.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 27.4
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 24.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 21.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 21.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 20.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 19.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 19.7
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 19.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 19.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 18.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.0
FF:10169-103B7 60 years, female 64.8
FF:10153-102I9 76 years, female 27.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 10.4
Min nTPM: 5.2
Sample A Female 10.4
Sample B Female 7.6
Sample C Male 6.0
Sample D Male 5.2
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.5
Sample A Female 2.9
Sample B Female 2.8
Sample C Male 2.5
Sample D Male 3.3
Subiculum
nTPM: 5.4
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.8
Sample A Female 6.0
Sample B Female 5.0
Sample C Male 5.7
Sample D Male 4.8
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 12.0
Min nTPM: 3.5
Sample A Female 4.5
Sample B Female 3.5
Sample C Male 4.5
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.9
Samples: 4

Max nTPM: 28.0
Min nTPM: 22.1
Sample A Male 27.1
Sample B Male 26.2
Sample C Female 22.1
Sample D Female 28.0
Hippocampal formation
nTPM: 27.2
Samples: 4

Max nTPM: 28.9
Min nTPM: 25.3
Sample A Male 28.9
Sample B Male 28.3
Sample C Female 26.4
Sample D Female 25.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
69608016 Antisense, RP_050426_03_D01, Mouse strain C57BL/6J (56 days, male) 2.3
73520974 Antisense, RP_051017_04_F02, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

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