HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.5 nTPM
HPA:15.5 nTPM
GTEx:11.9 nTPM
FANTOM5:40.9 Scaled Tags Per Million
Pig:29.7 nTPM
Mouse:36.8 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB017702
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1898 Male, age 80, left hemisphere 15.5
2529 Female, age 94, left hemisphere 11.5
2621 Female, age 67, right hemisphere 11.5
2148 Female, age 91, left hemisphere 11.1
1855 Male, age 76, left hemisphere 10.2
1911 Female, age 85, right hemisphere 8.2
Dentate gyrus
nTPM: 10.7
1927 Female, age 91, both hemispheres 13.5
2010 Male, age 76, both hemispheres 11.0
2528 Male, age 74, both hemispheres 11.0
2531 Female, age 67, both hemispheres 11.0
2246 Female, age 85, both hemispheres 9.3
2530 Female, age 94, left hemisphere 8.4
Entorhinal gyrus
nTPM: 11.7
2764 Male, age 80, right hemisphere 13.8
1938 Female, age 85, left hemisphere 13.2
2686 Male, age 75, right hemisphere 11.3
1787 Male, age 76, left hemisphere 10.8
2613 Female, age 94, left hemisphere 10.8
2117 Female, age 91, right hemisphere 10.3
Hippocampus, CA1
nTPM: 11.9
2749 Male, age 80, left hemisphere 16.7
2527 Male, age 74, both hemispheres 11.7
1873 Female, age 85, both hemispheres 11.6
2045 Male, age 76, both hemispheres 10.6
2082 Female, age 91, right hemisphere 8.9
Hippocampus, CA2
nTPM: 11.1
1892 Male, age 76, both hemispheres 13.6
1963 Male, age 80, left hemisphere 13.6
2249 Male, age 74, both hemispheres 12.0
2437 Female, age 94, left hemisphere 10.5
2113 Female, age 91, right hemisphere 9.3
1940 Female, age 85, left hemisphere 7.7
Hippocampus, CA3
nTPM: 12.7
2436 Male, age 74, both hemispheres 17.2
2137 Male, age 80, left hemisphere 13.9
2620 Female, age 94, left hemisphere 13.5
2861 Female, age 67, both hemispheres 10.8
1867 Male, age 76, both hemispheres 10.7
1891 Female, age 85, both hemispheres 10.0
Parahippocampal cortex
nTPM: 12.0
1850 Male, age 80, both hemispheres 17.3
1990 Female, age 91, right hemisphere 13.4
2532 Female, age 72, left hemisphere 13.1
1933 Female, age 85, both hemispheres 11.8
2693 Female, age 94, both hemispheres 11.8
2622 Female, age 67, right hemisphere 11.6
2245 Female, age 91, both hemispheres 11.0
2250 Female, age 67, right hemisphere 10.8
2692 Male, age 74, both hemispheres 10.2
2018 Male, age 76, both hemispheres 9.0
Perirhinal gyrus
nTPM: 15.5
1794 Male, age 80, right hemisphere 17.3
1847 Female, age 91, left hemisphere 17.3
1841 Female, age 85, right hemisphere 16.5
2848 Male, age 76, right hemisphere 14.1
2521 Female, age 94, right hemisphere 12.1
Subiculum
nTPM: 10.4
1977 Female, age 85, both hemispheres 12.2
1901 Male, age 80, both hemispheres 11.0
2438 Female, age 94, left hemisphere 11.0
2619 Male, age 74, both hemispheres 10.9
2729 Female, age 91, right hemisphere 10.5
2042 Male, age 76, both hemispheres 6.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 24.1
Min nTPM: 4.0
Std nTPM: 2.8
Median nTPM: 11.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 24.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 22.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 20.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 20.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 18.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 18.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 18.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 18.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 17.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 17.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.9
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 38.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 26.9
Min nTPM: 19.6
Sample A Female 26.9
Sample B Female 21.9
Sample C Male 22.7
Sample D Male 19.6
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 36.0
Min nTPM: 25.0
Sample A Female 29.8
Sample B Female 36.0
Sample C Male 28.2
Sample D Male 25.0
Subiculum
nTPM: 22.8
Samples: 4

Max nTPM: 32.6
Min nTPM: 18.8
Sample A Female 32.6
Sample B Female 20.6
Sample C Male 18.8
Sample D Male 19.0
Ventral hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 24.8
Min nTPM: 18.2
Sample A Female 24.8
Sample B Female 18.2
Sample C Male 22.6
Sample D Male 20.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 40.3
Min nTPM: 32.4
Sample A Male 38.0
Sample B Male 36.5
Sample C Female 32.4
Sample D Female 40.3
Hippocampal formation
nTPM: 34.4
Samples: 4

Max nTPM: 39.8
Min nTPM: 27.9
Sample A Male 31.5
Sample B Male 38.3
Sample C Female 39.8
Sample D Female 27.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
70200800 Antisense, RP_050517_02_E04, Mouse strain C57BL/6J (56 days, male) 2.3
73521827 Antisense, RP_051101_03_B11, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

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