We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MT-ND5
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • MT-ND5
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:25147.7 nTPM
HPA:25147.7 nTPM
Pig:6551.6 nTPM
Allen mouse:19.1 Expression energy

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 25147.7
Sample id Sample description nTPM
Area postrema
nTPM: 22023.5
2306 Male, age 80, both hemispheres 25389.5
2799 Male, age 61, both hemispheres 23951.5
2054 Male, age 76, both hemispheres 16729.5
Cuneate nuclei
nTPM: 22421.5
2381 Male, age 80, both hemispheres 27635.0
2131 Male, age 76, both hemispheres 22552.6
2376 Male, age 61, both hemispheres 17076.9
Dorsal medullary reticular nucleus
nTPM: 16140.8
2373 Male, age 61, both hemispheres 18568.9
2088 Male, age 76, both hemispheres 17269.1
2040 Female, age 85, both hemispheres 12584.3
Dorsal motor vagal complex
nTPM: 21529.2
2797 Male, age 61, both hemispheres 36121.8
2807 Female, age 85, both hemispheres 29934.0
2185 Male, age 76, both hemispheres 23171.4
2643 Male, age 74, both hemispheres 20613.9
2813 Female, age 72, unknown 19102.2
2844 Male, age 55, unknown 15812.4
2133 Female, age 91, both hemispheres 14515.0
2000 Male, age 74, unknown 12963.1
Gigantocellular reticular nuclei, medullary
nTPM: 17915.2
2387 Female, age 91, both hemispheres 23842.0
2310 Male, age 80, both hemispheres 23698.7
2314 Male, age 61, both hemispheres 20696.8
2462 Male, age 74, both hemispheres 14333.6
2022 Male, age 76, right hemisphere 13550.1
1876 Female, age 85, both hemispheres 11370.2
Gigantocellular reticular nuclei, pars
nTPM: 23003.1
2330 Male, age 80, both hemispheres 33268.8
2706 Male, age 80, both hemispheres 31071.8
2336 Male, age 61, both hemispheres 18809.3
2168 Male, age 76, both hemispheres 16029.9
2084 Female, age 85, both hemispheres 15835.7
Inferior olive
nTPM: 19781.3
2628 Female, age 91, both hemispheres 32190.6
2379 Male, age 80, both hemispheres 23148.6
2178 Male, age 61, both hemispheres 15744.1
2085 Female, age 85, both hemispheres 15074.4
2563 Male, age 74, both hemispheres 12748.8
Lateral medullary reticular nucleus
nTPM: 16151.9
2374 Male, age 61, both hemispheres 22535.0
2804 Female, age 91, both hemispheres 20938.6
2190 Female, age 85, both hemispheres 16447.8
2044 Male, age 76, both hemispheres 14440.0
2852 Male, age 80, both hemispheres 12196.5
2305 Male, age 74, both hemispheres 10353.4
Medial vestibular nucleus
nTPM: 17845.8
2624 Male, age 61, both hemispheres 26838.4
2803 Female, age 91, both hemispheres 19049.4
2134 Male, age 76, both hemispheres 18606.7
2801 Male, age 74, both hemispheres 15499.0
2093 Male, age 80, both hemispheres 14882.6
2743 Female, age 85, both hemispheres 12199.0
Motor hypoglossal nucleus
nTPM: 18552.1
2461 Male, age 61, both hemispheres 29855.2
2132 Female, age 85, both hemispheres 19567.5
2182 Male, age 80, both hemispheres 18543.8
2125 Female, age 91, both hemispheres 13241.2
2277 Male, age 76, both hemispheres 11552.6
Nucleus ambiguus
nTPM: 10981.8
2096 Female, age 85, both hemispheres 11114.9
2071 Male, age 76, both hemispheres 10848.7
Nucleus cuneatus
nTPM: 25147.7
2805 Female, age 91, both hemispheres 40858.4
2808 Female, age 85, both hemispheres 26906.8
2380 Male, age 80, both hemispheres 23327.6
2562 Male, age 61, both hemispheres 21841.9
2100 Male, age 76, both hemispheres 20710.6
2564 Male, age 74, both hemispheres 17240.8
Nucleus gracilis
nTPM: 23733.6
2299 Female, age 85, both hemispheres 27754.6
2382 Male, age 80, both hemispheres 27166.7
2627 Male, age 74, both hemispheres 16279.5
Nucleus raphe magnus
nTPM: 18291.1
2328 Male, age 80, both hemispheres 23702.4
2459 Female, age 91, both hemispheres 21938.8
2172 Female, age 85, both hemispheres 20608.6
2455 Male, age 74, both hemispheres 15393.4
2051 Male, age 76, both hemispheres 15132.9
2160 Male, age 61, both hemispheres 12970.4
Nucleus raphe obscurus
nTPM: 13504.1
2845 Female, age 85, midline 15088.1
2800 Male, age 61, midline 14783.9
2142 Male, age 76, midline 10640.3
Nucleus raphe pallidus
nTPM: 12071.5
2183 Male, age 80, midline 14760.3
2145 Male, age 76, midline 11720.1
1924 Male, age 61, midline 9734.0
Nucleus tractus solitarii
nTPM: 17506.9
2307 Male, age 80, both hemispheres 21948.3
2191 Female, age 85, both hemispheres 21555.1
2656 Male, age 76, both hemispheres 15275.5
2144 Female, age 91, right hemisphere 11248.7
Parvicellular reticular nuclei
nTPM: 15242.9
2558 Male, age 74, both hemispheres 16790.9
2095 Male, age 76, both hemispheres 16304.9
2119 Male, age 80, both hemispheres 12633.1
Parvicellular reticular nuclei, medullary
nTPM: 16635.8
2181 Male, age 80, left hemisphere 19443.7
2091 Female, age 85, both hemispheres 15246.0
2189 Female, age 91, both hemispheres 15217.6
Peritrigeminal nucleus
nTPM: 13528.8
2136 Male, age 76, both hemispheres 15757.7
2179 Male, age 61, both hemispheres 13319.0
2067 Female, age 85, both hemispheres 11509.7
Prepositus hypoglossal nucleus
nTPM: 15858.0
2855 Female, age 85, right hemisphere 17411.6
2086 Male, age 80, both hemispheres 14304.4
Spinal trigeminal nucleus, caudal
nTPM: 19383.5
2390 Female, age 91, both hemispheres 24040.5
2308 Male, age 80, both hemispheres 22424.5
2447 Male, age 76, both hemispheres 18080.0
2642 Male, age 74, both hemispheres 16364.1
2312 Male, age 61, both hemispheres 16008.6
Spinal trigeminal nucleus, interpolar
nTPM: 17632.9
2625 Male, age 61, both hemispheres 24949.7
2389 Female, age 91, both hemispheres 22597.7
2066 Male, age 76, right hemisphere 14023.5
2386 Female, age 85, both hemispheres 13429.7
2033 Male, age 80, both hemispheres 13164.0
Spinal vestibular nucleus
nTPM: 16629.5
2796 Male, age 61, both hemispheres 22375.8
2806 Female, age 85, both hemispheres 19576.5
2186 Female, age 91, both hemispheres 15312.7
2748 Male, age 76, both hemispheres 14435.8
2384 Male, age 74, both hemispheres 14412.6
2780 Male, age 80, both hemispheres 13663.5
Ventral medullary reticular nucleus
nTPM: 16708.4
2372 Male, age 61, both hemispheres 18611.6
2060 Male, age 76, both hemispheres 14805.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 15177.6
2302 Female, age 91, both hemispheres 19170.9
2180 Male, age 61, both hemispheres 16070.5
2118 Male, age 80, both hemispheres 14680.2
1986 Male, age 76, both hemispheres 13484.1
2741 Female, age 85, both hemispheres 12482.5

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 6551.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 6551.6
Samples: 4

Max nTPM: 7819.6
Min nTPM: 4923.9
Sample A Female 7819.6
Sample B Female 6737.6
Sample C Male 6725.3
Sample D Male 4923.9

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 19.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 19.1
75080269 Antisense, RP_060412_06_H09, Mouse strain C57BL/6J (56 days, male) 20.2
73906215 Antisense, RP_051212_04_H07, Mouse strain C57BL/6J (56 days, male) 18.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.