HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.4 nTPM
HPA:24.4 nTPM
GTEx:23.5 nTPM
FANTOM5:51.9 Scaled Tags Per Million
Pig:25.9 nTPM
Mouse:15.9 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051818
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.4
Sample id Sample description nTPM
Hippocampus
nTPM: 23.3
1898 Male, age 80, left hemisphere 24.9
1911 Female, age 85, right hemisphere 24.1
2621 Female, age 67, right hemisphere 23.1
1855 Male, age 76, left hemisphere 22.8
2529 Female, age 94, left hemisphere 22.5
2148 Female, age 91, left hemisphere 22.4
Dentate gyrus
nTPM: 23.5
2010 Male, age 76, both hemispheres 25.5
1927 Female, age 91, both hemispheres 24.3
2246 Female, age 85, both hemispheres 23.8
2531 Female, age 67, both hemispheres 23.0
2528 Male, age 74, both hemispheres 22.5
2530 Female, age 94, left hemisphere 21.6
Entorhinal gyrus
nTPM: 22.8
1938 Female, age 85, left hemisphere 24.3
1787 Male, age 76, left hemisphere 23.1
2117 Female, age 91, right hemisphere 22.8
2764 Male, age 80, right hemisphere 22.5
2613 Female, age 94, left hemisphere 22.0
2686 Male, age 75, right hemisphere 21.9
Hippocampus, CA1
nTPM: 24.3
2749 Male, age 80, left hemisphere 26.8
2045 Male, age 76, both hemispheres 25.2
1873 Female, age 85, both hemispheres 24.6
2527 Male, age 74, both hemispheres 22.6
2082 Female, age 91, right hemisphere 22.0
Hippocampus, CA2
nTPM: 23.3
1892 Male, age 76, both hemispheres 26.4
2249 Male, age 74, both hemispheres 23.3
1963 Male, age 80, left hemisphere 23.2
2113 Female, age 91, right hemisphere 22.8
1940 Female, age 85, left hemisphere 22.5
2437 Female, age 94, left hemisphere 21.4
Hippocampus, CA3
nTPM: 24.2
1867 Male, age 76, both hemispheres 26.6
2137 Male, age 80, left hemisphere 26.2
1891 Female, age 85, both hemispheres 24.2
2436 Male, age 74, both hemispheres 23.4
2620 Female, age 94, left hemisphere 23.1
2861 Female, age 67, both hemispheres 21.5
Parahippocampal cortex
nTPM: 22.9
1850 Male, age 80, both hemispheres 24.8
1933 Female, age 85, both hemispheres 24.0
2018 Male, age 76, both hemispheres 23.8
2532 Female, age 72, left hemisphere 23.5
1990 Female, age 91, right hemisphere 23.2
2245 Female, age 91, both hemispheres 23.1
2250 Female, age 67, right hemisphere 22.9
2693 Female, age 94, both hemispheres 22.8
2692 Male, age 74, both hemispheres 20.8
2622 Female, age 67, right hemisphere 20.4
Perirhinal gyrus
nTPM: 24.4
1841 Female, age 85, right hemisphere 25.3
1794 Male, age 80, right hemisphere 25.0
1847 Female, age 91, left hemisphere 24.7
2521 Female, age 94, right hemisphere 24.4
2848 Male, age 76, right hemisphere 22.5
Subiculum
nTPM: 22.5
1901 Male, age 80, both hemispheres 24.9
1977 Female, age 85, both hemispheres 23.2
2042 Male, age 76, both hemispheres 23.1
2619 Male, age 74, both hemispheres 22.8
2729 Female, age 91, right hemisphere 21.5
2438 Female, age 94, left hemisphere 19.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.5
Samples: 197

Max nTPM: 50.6
Min nTPM: 12.5
Std nTPM: 5.3
Median nTPM: 22.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 50.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 43.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 38.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 35.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 35.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 34.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 33.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 33.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 33.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.9
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 43.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 30.3
Min nTPM: 22.5
Sample A Female 30.3
Sample B Female 25.7
Sample C Male 25.1
Sample D Male 22.5
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 24.5
Min nTPM: 19.8
Sample A Female 24.5
Sample B Female 24.2
Sample C Male 20.8
Sample D Male 19.8
Subiculum
nTPM: 21.7
Samples: 4

Max nTPM: 27.8
Min nTPM: 18.6
Sample A Female 27.8
Sample B Female 18.6
Sample C Male 20.2
Sample D Male 20.3
Ventral hippocampus
nTPM: 21.2
Samples: 4

Max nTPM: 25.0
Min nTPM: 17.6
Sample A Female 23.6
Sample B Female 17.6
Sample C Male 18.5
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 16.8
Min nTPM: 10.6
Sample A Male 15.2
Sample B Male 16.8
Sample C Female 15.9
Sample D Female 10.6
Hippocampal formation
nTPM: 15.9
Samples: 4

Max nTPM: 20.9
Min nTPM: 13.3
Sample A Male 20.9
Sample B Male 15.7
Sample C Female 13.3
Sample D Female 13.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69671588 Antisense, RP_050428_01_H01, Mouse strain C57BL/6J (56 days, male) 3.4

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