HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:93.1 nTPM
HPA:93.1 nTPM
GTEx:130.6 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:21.8 nTPM
Mouse:44.5 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028185Antibody HPA062105Antibody CAB004205
Glial cells MediumNot detectedMedium
Neuronal cells MediumLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.1
Sample id Sample description nTPM
Hippocampus
nTPM: 92.2
1898 Male, age 80, left hemisphere 96.1
2529 Female, age 94, left hemisphere 93.5
2148 Female, age 91, left hemisphere 92.3
1855 Male, age 76, left hemisphere 91.6
1911 Female, age 85, right hemisphere 91.2
2621 Female, age 67, right hemisphere 88.6
Dentate gyrus
nTPM: 93.0
2530 Female, age 94, left hemisphere 97.8
1927 Female, age 91, both hemispheres 96.6
2528 Male, age 74, both hemispheres 94.2
2010 Male, age 76, both hemispheres 90.2
2246 Female, age 85, both hemispheres 90.1
2531 Female, age 67, both hemispheres 89.4
Entorhinal gyrus
nTPM: 90.3
1938 Female, age 85, left hemisphere 93.0
2764 Male, age 80, right hemisphere 92.6
2117 Female, age 91, right hemisphere 91.8
1787 Male, age 76, left hemisphere 91.4
2613 Female, age 94, left hemisphere 87.4
2686 Male, age 75, right hemisphere 85.6
Hippocampus, CA1
nTPM: 93.1
2749 Male, age 80, left hemisphere 103.0
2527 Male, age 74, both hemispheres 92.5
2045 Male, age 76, both hemispheres 90.3
1873 Female, age 85, both hemispheres 89.9
2082 Female, age 91, right hemisphere 89.6
Hippocampus, CA2
nTPM: 91.6
1963 Male, age 80, left hemisphere 100.9
1892 Male, age 76, both hemispheres 92.1
2437 Female, age 94, left hemisphere 91.6
2113 Female, age 91, right hemisphere 88.6
2249 Male, age 74, both hemispheres 88.5
1940 Female, age 85, left hemisphere 87.9
Hippocampus, CA3
nTPM: 91.9
2137 Male, age 80, left hemisphere 97.6
2861 Female, age 67, both hemispheres 95.5
1867 Male, age 76, both hemispheres 91.5
2620 Female, age 94, left hemisphere 89.8
2436 Male, age 74, both hemispheres 89.5
1891 Female, age 85, both hemispheres 87.5
Parahippocampal cortex
nTPM: 87.6
2245 Female, age 91, both hemispheres 92.6
1933 Female, age 85, both hemispheres 90.9
2692 Male, age 74, both hemispheres 89.4
2622 Female, age 67, right hemisphere 88.1
1990 Female, age 91, right hemisphere 87.4
2250 Female, age 67, right hemisphere 87.4
2532 Female, age 72, left hemisphere 87.0
1850 Male, age 80, both hemispheres 86.7
2018 Male, age 76, both hemispheres 83.9
2693 Female, age 94, both hemispheres 83.1
Perirhinal gyrus
nTPM: 89.8
1847 Female, age 91, left hemisphere 91.9
2521 Female, age 94, right hemisphere 91.9
1794 Male, age 80, right hemisphere 90.3
1841 Female, age 85, right hemisphere 88.3
2848 Male, age 76, right hemisphere 86.5
Subiculum
nTPM: 88.2
2729 Female, age 91, right hemisphere 91.1
1901 Male, age 80, both hemispheres 90.7
2619 Male, age 74, both hemispheres 89.4
1977 Female, age 85, both hemispheres 89.3
2042 Male, age 76, both hemispheres 88.7
2438 Female, age 94, left hemisphere 79.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 130.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 130.6
Samples: 197

Max nTPM: 309.7
Min nTPM: 40.6
Std nTPM: 40.4
Median nTPM: 124.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 309.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 258.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 228.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 221.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 218.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 216.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 215.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 211.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 203.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 201.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 201.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10153-102I9 76 years, female 21.5
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 29.0
Min nTPM: 18.2
Sample A Female 29.0
Sample B Female 20.8
Sample C Male 19.1
Sample D Male 18.2
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 27.2
Min nTPM: 17.9
Sample A Female 18.3
Sample B Female 21.8
Sample C Male 27.2
Sample D Male 17.9
Subiculum
nTPM: 20.8
Samples: 4

Max nTPM: 25.9
Min nTPM: 17.9
Sample A Female 25.9
Sample B Female 20.3
Sample C Male 19.2
Sample D Male 17.9
Ventral hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 26.6
Min nTPM: 18.3
Sample A Female 21.0
Sample B Female 18.3
Sample C Male 26.6
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.7
Samples: 4

Max nTPM: 43.8
Min nTPM: 37.9
Sample A Male 38.5
Sample B Male 42.4
Sample C Female 43.8
Sample D Female 37.9
Hippocampal formation
nTPM: 44.6
Samples: 4

Max nTPM: 56.3
Min nTPM: 36.7
Sample A Male 36.7
Sample B Male 40.5
Sample C Female 44.7
Sample D Female 56.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
74881790 Antisense, RP_060315_04_D03, Mouse strain C57BL/6J (56 days, male) 2.7
69528052 Antisense, RP_050421_03_A05, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

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