HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.0 nTPM
HPA:51.0 nTPM
GTEx:49.5 nTPM
FANTOM5:75.7 Scaled Tags Per Million
Pig:56.9 nTPM
Mouse:17.7 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026272Antibody HPA027164
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.0
Sample id Sample description nTPM
Hippocampus
nTPM: 50.2
2148 Female, age 91, left hemisphere 52.5
2621 Female, age 67, right hemisphere 51.8
1855 Male, age 76, left hemisphere 50.8
2529 Female, age 94, left hemisphere 50.0
1911 Female, age 85, right hemisphere 49.9
1898 Male, age 80, left hemisphere 46.1
Dentate gyrus
nTPM: 50.0
2531 Female, age 67, both hemispheres 55.3
2246 Female, age 85, both hemispheres 50.3
2010 Male, age 76, both hemispheres 49.3
2530 Female, age 94, left hemisphere 48.9
2528 Male, age 74, both hemispheres 48.3
1927 Female, age 91, both hemispheres 47.8
Entorhinal gyrus
nTPM: 51.0
2686 Male, age 75, right hemisphere 56.3
2613 Female, age 94, left hemisphere 54.6
1787 Male, age 76, left hemisphere 49.6
1938 Female, age 85, left hemisphere 48.9
2764 Male, age 80, right hemisphere 48.9
2117 Female, age 91, right hemisphere 47.7
Hippocampus, CA1
nTPM: 48.6
2082 Female, age 91, right hemisphere 49.6
2045 Male, age 76, both hemispheres 48.9
2527 Male, age 74, both hemispheres 48.6
1873 Female, age 85, both hemispheres 48.5
2749 Male, age 80, left hemisphere 47.4
Hippocampus, CA2
nTPM: 49.0
1940 Female, age 85, left hemisphere 51.6
2437 Female, age 94, left hemisphere 51.0
1963 Male, age 80, left hemisphere 49.9
1892 Male, age 76, both hemispheres 49.0
2113 Female, age 91, right hemisphere 47.9
2249 Male, age 74, both hemispheres 44.4
Hippocampus, CA3
nTPM: 50.3
2620 Female, age 94, left hemisphere 53.9
2861 Female, age 67, both hemispheres 53.8
1891 Female, age 85, both hemispheres 49.8
2137 Male, age 80, left hemisphere 49.6
1867 Male, age 76, both hemispheres 48.9
2436 Male, age 74, both hemispheres 45.6
Parahippocampal cortex
nTPM: 50.6
2622 Female, age 67, right hemisphere 58.2
2692 Male, age 74, both hemispheres 53.7
2693 Female, age 94, both hemispheres 51.8
2532 Female, age 72, left hemisphere 50.9
2018 Male, age 76, both hemispheres 49.3
1850 Male, age 80, both hemispheres 49.0
1933 Female, age 85, both hemispheres 49.0
2250 Female, age 67, right hemisphere 49.0
2245 Female, age 91, both hemispheres 48.3
1990 Female, age 91, right hemisphere 47.0
Perirhinal gyrus
nTPM: 49.2
2848 Male, age 76, right hemisphere 53.5
1794 Male, age 80, right hemisphere 49.5
1841 Female, age 85, right hemisphere 48.7
1847 Female, age 91, left hemisphere 47.5
2521 Female, age 94, right hemisphere 46.7
Subiculum
nTPM: 48.6
2042 Male, age 76, both hemispheres 50.9
2619 Male, age 74, both hemispheres 50.8
2729 Female, age 91, right hemisphere 48.9
1901 Male, age 80, both hemispheres 48.8
1977 Female, age 85, both hemispheres 47.2
2438 Female, age 94, left hemisphere 44.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.5
Samples: 197

Max nTPM: 136.8
Min nTPM: 15.5
Std nTPM: 18.0
Median nTPM: 45.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 136.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 99.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 98.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 95.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 95.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 94.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 91.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 90.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 89.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 89.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 85.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.7
FF:10153-102I9 76 years, female 86.6
FF:10169-103B7 60 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.5
Samples: 4

Max nTPM: 51.9
Min nTPM: 35.0
Sample A Female 48.1
Sample B Female 38.9
Sample C Male 51.9
Sample D Male 35.0
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 70.7
Min nTPM: 48.6
Sample A Female 48.6
Sample B Female 70.7
Sample C Male 57.4
Sample D Male 51.1
Subiculum
nTPM: 50.1
Samples: 4

Max nTPM: 70.9
Min nTPM: 41.0
Sample A Female 70.9
Sample B Female 46.4
Sample C Male 41.0
Sample D Male 42.0
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 45.9
Min nTPM: 38.4
Sample A Female 38.6
Sample B Female 38.4
Sample C Male 45.9
Sample D Male 43.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 19.3
Min nTPM: 14.4
Sample A Male 14.4
Sample B Male 17.4
Sample C Female 17.1
Sample D Female 19.3
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.9
Sample A Male 14.9
Sample B Male 18.6
Sample C Female 18.0
Sample D Female 19.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
68562988 Antisense, RP_050120_02_H05, Mouse strain C57BL/6J (56 days, male) 7.8

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