HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.8 nTPM
HPA:11.8 nTPM
GTEx:23.6 nTPM
FANTOM5:29.9 Scaled Tags Per Million
Pig:7.3 nTPM
Mouse:15.2 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005592
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.8
Sample id Sample description nTPM
Hippocampus
nTPM: 11.2
2529 Female, age 94, left hemisphere 13.2
2148 Female, age 91, left hemisphere 13.0
1911 Female, age 85, right hemisphere 11.2
1898 Male, age 80, left hemisphere 10.4
1855 Male, age 76, left hemisphere 10.3
2621 Female, age 67, right hemisphere 9.1
Dentate gyrus
nTPM: 11.3
2528 Male, age 74, both hemispheres 13.4
2530 Female, age 94, left hemisphere 12.6
2246 Female, age 85, both hemispheres 11.6
1927 Female, age 91, both hemispheres 10.9
2531 Female, age 67, both hemispheres 10.3
2010 Male, age 76, both hemispheres 8.9
Entorhinal gyrus
nTPM: 10.6
2117 Female, age 91, right hemisphere 12.2
2686 Male, age 75, right hemisphere 11.8
2764 Male, age 80, right hemisphere 11.5
2613 Female, age 94, left hemisphere 11.2
1787 Male, age 76, left hemisphere 9.8
1938 Female, age 85, left hemisphere 6.8
Hippocampus, CA1
nTPM: 10.7
2082 Female, age 91, right hemisphere 13.6
2527 Male, age 74, both hemispheres 11.5
1873 Female, age 85, both hemispheres 10.7
2749 Male, age 80, left hemisphere 9.1
2045 Male, age 76, both hemispheres 8.6
Hippocampus, CA2
nTPM: 11.8
2249 Male, age 74, both hemispheres 13.3
2113 Female, age 91, right hemisphere 12.8
1940 Female, age 85, left hemisphere 12.3
2437 Female, age 94, left hemisphere 12.2
1963 Male, age 80, left hemisphere 11.2
1892 Male, age 76, both hemispheres 9.1
Hippocampus, CA3
nTPM: 11.4
2620 Female, age 94, left hemisphere 14.1
2436 Male, age 74, both hemispheres 12.8
2861 Female, age 67, both hemispheres 10.8
1891 Female, age 85, both hemispheres 10.5
1867 Male, age 76, both hemispheres 10.1
2137 Male, age 80, left hemisphere 9.9
Parahippocampal cortex
nTPM: 10.5
2622 Female, age 67, right hemisphere 14.1
2692 Male, age 74, both hemispheres 12.3
1990 Female, age 91, right hemisphere 11.2
2693 Female, age 94, both hemispheres 10.6
2250 Female, age 67, right hemisphere 10.5
1933 Female, age 85, both hemispheres 9.8
2018 Male, age 76, both hemispheres 9.6
2245 Female, age 91, both hemispheres 9.5
2532 Female, age 72, left hemisphere 9.2
1850 Male, age 80, both hemispheres 8.1
Perirhinal gyrus
nTPM: 9.2
2521 Female, age 94, right hemisphere 11.3
1794 Male, age 80, right hemisphere 10.3
1847 Female, age 91, left hemisphere 8.6
2848 Male, age 76, right hemisphere 8.3
1841 Female, age 85, right hemisphere 7.7
Subiculum
nTPM: 11.3
2729 Female, age 91, right hemisphere 14.0
2619 Male, age 74, both hemispheres 13.4
1901 Male, age 80, both hemispheres 10.7
1977 Female, age 85, both hemispheres 10.5
2438 Female, age 94, left hemisphere 9.9
2042 Male, age 76, both hemispheres 9.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.6
Samples: 197

Max nTPM: 39.0
Min nTPM: 7.5
Std nTPM: 6.2
Median nTPM: 22.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 39.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 38.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 38.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 37.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 36.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 35.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 35.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 35.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 35.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 34.8
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 34.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.9
FF:10153-102I9 76 years, female 36.9
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 7.8
Min nTPM: 6.8
Sample A Female 7.8
Sample B Female 7.6
Sample C Male 6.8
Sample D Male 6.9
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.4
Sample A Female 7.5
Sample B Female 6.8
Sample C Male 6.4
Sample D Male 7.0
Subiculum
nTPM: 6.6
Samples: 4

Max nTPM: 6.7
Min nTPM: 6.4
Sample A Female 6.4
Sample B Female 6.6
Sample C Male 6.7
Sample D Male 6.7
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.4
Sample A Female 6.9
Sample B Female 6.4
Sample C Male 7.3
Sample D Male 8.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.4
Min nTPM: 14.1
Sample A Male 14.1
Sample B Male 15.6
Sample C Female 14.2
Sample D Female 16.4
Hippocampal formation
nTPM: 15.2
Samples: 4

Max nTPM: 17.4
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 14.2
Sample C Female 17.4
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
69407487 Antisense, RP_050414_01_G05, Mouse strain C57BL/6J (56 days, male) 2.1

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