HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:54.0 nTPM
HPA:54.0 nTPM
GTEx:77.7 nTPM
FANTOM5:26.1 Scaled Tags Per Million
Pig:30.7 nTPM
Mouse:23.8 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.0
Sample id Sample description nTPM
Hippocampus
nTPM: 44.6
1911 Female, age 85, right hemisphere 50.7
2529 Female, age 94, left hemisphere 46.6
2621 Female, age 67, right hemisphere 44.8
1855 Male, age 76, left hemisphere 43.4
2148 Female, age 91, left hemisphere 41.7
1898 Male, age 80, left hemisphere 40.6
Dentate gyrus
nTPM: 42.6
2530 Female, age 94, left hemisphere 52.5
2010 Male, age 76, both hemispheres 45.6
2528 Male, age 74, both hemispheres 43.5
2246 Female, age 85, both hemispheres 40.3
2531 Female, age 67, both hemispheres 38.4
1927 Female, age 91, both hemispheres 35.5
Entorhinal gyrus
nTPM: 49.6
2117 Female, age 91, right hemisphere 68.5
2764 Male, age 80, right hemisphere 56.8
2613 Female, age 94, left hemisphere 45.7
1787 Male, age 76, left hemisphere 44.5
1938 Female, age 85, left hemisphere 42.6
2686 Male, age 75, right hemisphere 39.4
Hippocampus, CA1
nTPM: 41.0
2527 Male, age 74, both hemispheres 46.4
2082 Female, age 91, right hemisphere 45.6
2749 Male, age 80, left hemisphere 40.7
1873 Female, age 85, both hemispheres 39.4
2045 Male, age 76, both hemispheres 33.1
Hippocampus, CA2
nTPM: 45.3
1963 Male, age 80, left hemisphere 50.7
2113 Female, age 91, right hemisphere 47.6
2437 Female, age 94, left hemisphere 47.3
2249 Male, age 74, both hemispheres 46.8
1940 Female, age 85, left hemisphere 44.5
1892 Male, age 76, both hemispheres 35.0
Hippocampus, CA3
nTPM: 37.7
1891 Female, age 85, both hemispheres 50.0
1867 Male, age 76, both hemispheres 43.5
2436 Male, age 74, both hemispheres 36.2
2137 Male, age 80, left hemisphere 33.8
2861 Female, age 67, both hemispheres 33.3
2620 Female, age 94, left hemisphere 29.0
Parahippocampal cortex
nTPM: 42.6
2532 Female, age 72, left hemisphere 52.4
2692 Male, age 74, both hemispheres 50.6
1990 Female, age 91, right hemisphere 46.0
2018 Male, age 76, both hemispheres 45.0
2245 Female, age 91, both hemispheres 42.9
1933 Female, age 85, both hemispheres 40.8
1850 Male, age 80, both hemispheres 38.9
2250 Female, age 67, right hemisphere 37.5
2622 Female, age 67, right hemisphere 35.9
2693 Female, age 94, both hemispheres 35.9
Perirhinal gyrus
nTPM: 36.1
2521 Female, age 94, right hemisphere 38.6
1794 Male, age 80, right hemisphere 37.3
2848 Male, age 76, right hemisphere 36.1
1847 Female, age 91, left hemisphere 34.9
1841 Female, age 85, right hemisphere 33.6
Subiculum
nTPM: 54.0
2042 Male, age 76, both hemispheres 65.7
1901 Male, age 80, both hemispheres 58.6
1977 Female, age 85, both hemispheres 54.6
2438 Female, age 94, left hemisphere 51.7
2619 Male, age 74, both hemispheres 48.1
2729 Female, age 91, right hemisphere 45.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.7
Samples: 197

Max nTPM: 326.2
Min nTPM: 17.3
Std nTPM: 45.5
Median nTPM: 66.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 326.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 233.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 214.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 208.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 196.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 196.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 178.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 171.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 165.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 163.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 155.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.1
FF:10153-102I9 76 years, female 44.9
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 45.6
Min nTPM: 13.8
Sample A Female 45.6
Sample B Female 23.6
Sample C Male 39.7
Sample D Male 13.8
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.1
Sample A Female 15.1
Sample B Female 15.4
Sample C Male 19.6
Sample D Male 15.2
Subiculum
nTPM: 23.6
Samples: 4

Max nTPM: 30.9
Min nTPM: 19.2
Sample A Female 30.9
Sample B Female 21.7
Sample C Male 22.5
Sample D Male 19.2
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 32.6
Min nTPM: 16.8
Sample A Female 31.5
Sample B Female 16.8
Sample C Male 32.6
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 27.5
Min nTPM: 16.6
Sample A Male 27.5
Sample B Male 23.4
Sample C Female 18.6
Sample D Female 16.6
Hippocampal formation
nTPM: 23.8
Samples: 4

Max nTPM: 26.5
Min nTPM: 21.1
Sample A Male 21.1
Sample B Male 22.6
Sample C Female 26.5
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
74988736 Antisense, RP_060315_04_B04, Mouse strain C57BL/6J (56 days, male) 3.3
70593371 Antisense, RP_050407_04_B08, Mouse strain C57BL/6J (56 days, male) 3.1

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