HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:16.4 nTPM
FANTOM5:69.8 Scaled Tags Per Million
Pig:25.2 nTPM
Mouse:57.9 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
1898 Male, age 80, left hemisphere 17.2
2529 Female, age 94, left hemisphere 16.4
1855 Male, age 76, left hemisphere 15.2
1911 Female, age 85, right hemisphere 15.1
2148 Female, age 91, left hemisphere 13.7
2621 Female, age 67, right hemisphere 13.0
Dentate gyrus
nTPM: 14.7
2010 Male, age 76, both hemispheres 16.0
2528 Male, age 74, both hemispheres 15.5
2530 Female, age 94, left hemisphere 15.5
1927 Female, age 91, both hemispheres 15.3
2246 Female, age 85, both hemispheres 14.1
2531 Female, age 67, both hemispheres 11.7
Entorhinal gyrus
nTPM: 16.1
2117 Female, age 91, right hemisphere 18.9
1938 Female, age 85, left hemisphere 17.5
2764 Male, age 80, right hemisphere 16.3
2686 Male, age 75, right hemisphere 15.5
1787 Male, age 76, left hemisphere 14.7
2613 Female, age 94, left hemisphere 13.4
Hippocampus, CA1
nTPM: 14.9
1873 Female, age 85, both hemispheres 15.7
2527 Male, age 74, both hemispheres 15.7
2045 Male, age 76, both hemispheres 14.7
2749 Male, age 80, left hemisphere 14.5
2082 Female, age 91, right hemisphere 13.9
Hippocampus, CA2
nTPM: 15.1
2249 Male, age 74, both hemispheres 15.8
1940 Female, age 85, left hemisphere 15.7
1892 Male, age 76, both hemispheres 15.0
1963 Male, age 80, left hemisphere 14.9
2113 Female, age 91, right hemisphere 14.7
2437 Female, age 94, left hemisphere 14.3
Hippocampus, CA3
nTPM: 14.5
1891 Female, age 85, both hemispheres 17.0
1867 Male, age 76, both hemispheres 15.6
2137 Male, age 80, left hemisphere 14.5
2436 Male, age 74, both hemispheres 13.9
2620 Female, age 94, left hemisphere 13.5
2861 Female, age 67, both hemispheres 12.7
Parahippocampal cortex
nTPM: 16.0
1850 Male, age 80, both hemispheres 18.6
1990 Female, age 91, right hemisphere 17.6
1933 Female, age 85, both hemispheres 17.2
2692 Male, age 74, both hemispheres 16.6
2018 Male, age 76, both hemispheres 16.5
2693 Female, age 94, both hemispheres 16.5
2532 Female, age 72, left hemisphere 15.9
2250 Female, age 67, right hemisphere 14.7
2245 Female, age 91, both hemispheres 14.5
2622 Female, age 67, right hemisphere 11.7
Perirhinal gyrus
nTPM: 17.1
1841 Female, age 85, right hemisphere 19.2
1794 Male, age 80, right hemisphere 17.3
2521 Female, age 94, right hemisphere 16.9
1847 Female, age 91, left hemisphere 16.1
2848 Male, age 76, right hemisphere 15.8
Subiculum
nTPM: 15.2
1977 Female, age 85, both hemispheres 17.1
2042 Male, age 76, both hemispheres 16.5
1901 Male, age 80, both hemispheres 16.1
2619 Male, age 74, both hemispheres 14.8
2729 Female, age 91, right hemisphere 14.1
2438 Female, age 94, left hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.4
Samples: 197

Max nTPM: 30.9
Min nTPM: 8.3
Std nTPM: 3.9
Median nTPM: 15.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 30.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 28.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 28.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 28.3
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 26.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 26.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 25.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 24.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 24.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 23.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.8
FF:10153-102I9 76 years, female 76.9
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.2
Samples: 4

Max nTPM: 31.4
Min nTPM: 19.2
Sample A Female 31.4
Sample B Female 25.9
Sample C Male 24.3
Sample D Male 19.2
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 24.6
Min nTPM: 18.7
Sample A Female 23.2
Sample B Female 24.6
Sample C Male 22.6
Sample D Male 18.7
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 30.2
Min nTPM: 20.6
Sample A Female 30.2
Sample B Female 22.0
Sample C Male 21.0
Sample D Male 20.6
Ventral hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 27.2
Min nTPM: 20.3
Sample A Female 27.2
Sample B Female 20.3
Sample C Male 21.7
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.7
Samples: 4

Max nTPM: 61.6
Min nTPM: 51.5
Sample A Male 58.1
Sample B Male 61.6
Sample C Female 59.5
Sample D Female 51.5
Hippocampal formation
nTPM: 58.0
Samples: 4

Max nTPM: 68.1
Min nTPM: 52.9
Sample A Male 68.1
Sample B Male 56.6
Sample C Female 54.2
Sample D Female 52.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
77465054 Antisense, RP_070129_03_A10, Mouse strain C57BL/6J (56 days, male) 9.0

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