HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Mouse brain, Intensity
Hippocampal formationi 		52.145
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:134.1 nTPM
HPA:134.1 nTPM
GTEx:66.1 nTPM
FANTOM5:56.7 Scaled Tags Per Million
Pig:32.0 nTPM
Mouse:86.9 nTPM
Allen mouse:17.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051979
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA051979
Hippocampal formation mean intensity 52.145
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 52.145
Molecular layer of the dentate gyrus 32.325
Granular dentate gyrus 50.485
CA1 - oriens layer 22.323
CA1 - pyramidal layer 33.331
CA1 - radiatum layer 25.389
CA2 - oriens layer 33.207
CA2 - pyramidal layer 48.917
CA2 - radiatum layer 37.370
CA3 - oriens layer 38.854
CA3 - pyramidal layer 48.498
CA3 - radiatum layer 39.308
Stratum lucidum 45.096
Lacunosum moleculare 22.156
Subiculum 21.867

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 134.1
Sample id Sample description nTPM
Hippocampus
nTPM: 115.9
2148 Female, age 91, left hemisphere 127.5
2529 Female, age 94, left hemisphere 120.5
1855 Male, age 76, left hemisphere 119.5
1898 Male, age 80, left hemisphere 114.2
2621 Female, age 67, right hemisphere 110.4
1911 Female, age 85, right hemisphere 103.6
Dentate gyrus
nTPM: 118.2
2528 Male, age 74, both hemispheres 130.9
2246 Female, age 85, both hemispheres 122.2
2531 Female, age 67, both hemispheres 121.6
2530 Female, age 94, left hemisphere 121.4
1927 Female, age 91, both hemispheres 110.9
2010 Male, age 76, both hemispheres 102.0
Entorhinal gyrus
nTPM: 130.5
1787 Male, age 76, left hemisphere 141.1
2117 Female, age 91, right hemisphere 136.2
2613 Female, age 94, left hemisphere 128.7
2764 Male, age 80, right hemisphere 126.9
1938 Female, age 85, left hemisphere 125.5
2686 Male, age 75, right hemisphere 124.3
Hippocampus, CA1
nTPM: 110.2
2527 Male, age 74, both hemispheres 127.0
2045 Male, age 76, both hemispheres 114.9
2082 Female, age 91, right hemisphere 111.0
1873 Female, age 85, both hemispheres 108.7
2749 Male, age 80, left hemisphere 89.4
Hippocampus, CA2
nTPM: 111.2
2437 Female, age 94, left hemisphere 121.5
1940 Female, age 85, left hemisphere 118.1
2249 Male, age 74, both hemispheres 113.6
2113 Female, age 91, right hemisphere 109.8
1963 Male, age 80, left hemisphere 102.6
1892 Male, age 76, both hemispheres 101.7
Hippocampus, CA3
nTPM: 112.5
2861 Female, age 67, both hemispheres 136.1
2620 Female, age 94, left hemisphere 125.1
2436 Male, age 74, both hemispheres 117.9
1891 Female, age 85, both hemispheres 106.2
1867 Male, age 76, both hemispheres 99.9
2137 Male, age 80, left hemisphere 89.9
Parahippocampal cortex
nTPM: 124.8
2622 Female, age 67, right hemisphere 140.4
2250 Female, age 67, right hemisphere 133.4
1933 Female, age 85, both hemispheres 130.9
2692 Male, age 74, both hemispheres 123.9
2532 Female, age 72, left hemisphere 123.4
2693 Female, age 94, both hemispheres 122.2
1850 Male, age 80, both hemispheres 119.5
2245 Female, age 91, both hemispheres 119.4
1990 Female, age 91, right hemisphere 119.3
2018 Male, age 76, both hemispheres 115.5
Perirhinal gyrus
nTPM: 134.1
1794 Male, age 80, right hemisphere 147.5
2521 Female, age 94, right hemisphere 141.1
1841 Female, age 85, right hemisphere 130.3
1847 Female, age 91, left hemisphere 128.9
2848 Male, age 76, right hemisphere 122.9
Subiculum
nTPM: 114.4
2619 Male, age 74, both hemispheres 132.4
2729 Female, age 91, right hemisphere 127.1
1977 Female, age 85, both hemispheres 118.4
2438 Female, age 94, left hemisphere 108.6
2042 Male, age 76, both hemispheres 100.3
1901 Male, age 80, both hemispheres 99.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.1
Samples: 197

Max nTPM: 174.6
Min nTPM: 19.6
Std nTPM: 27.0
Median nTPM: 62.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 174.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 157.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 157.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 157.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 134.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 128.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 128.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 124.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 116.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 115.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 109.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.7
FF:10153-102I9 76 years, female 60.1
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 30.1
Min nTPM: 18.9
Sample A Female 26.6
Sample B Female 30.1
Sample C Male 23.2
Sample D Male 18.9
Entorhinal cortex
nTPM: 32.0
Samples: 4

Max nTPM: 34.6
Min nTPM: 30.0
Sample A Female 32.4
Sample B Female 30.0
Sample C Male 34.6
Sample D Male 31.1
Subiculum
nTPM: 26.8
Samples: 4

Max nTPM: 38.2
Min nTPM: 20.1
Sample A Female 38.2
Sample B Female 23.1
Sample C Male 25.6
Sample D Male 20.1
Ventral hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 38.6
Min nTPM: 18.3
Sample A Female 32.6
Sample B Female 18.3
Sample C Male 38.6
Sample D Male 25.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.9
Samples: 4

Max nTPM: 101.8
Min nTPM: 67.8
Sample A Male 78.7
Sample B Male 99.4
Sample C Female 67.8
Sample D Female 101.8
Hippocampal formation
nTPM: 49.4
Samples: 4

Max nTPM: 58.6
Min nTPM: 44.3
Sample A Male 44.3
Sample B Male 49.5
Sample C Female 45.1
Sample D Female 58.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.6
70436749 Antisense, RP_050324_01_D05, Mouse strain C57BL/6J (56 days, male) 17.6
69080015 Antisense, RP_050324_01_D05, Mouse strain C57BL/6J (56 days, male) 14.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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