COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:38.2 nTPM
HPA:9.5 nTPM
GTEx:38.2 nTPM
FANTOM5:6.6 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 9.5
overview
Male, age 54 		Colon sample 67
nTPM: 12.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 9.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 6.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 13.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 3.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 12.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 16.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 38.2
Samples: 373

Max nTPM: 118.2
Min nTPM: 14.0
Std nTPM: 17.1
Median nTPM: 33.9
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 118.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 99.5
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 98.3
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 96.1
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 94.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 88.7
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 86.9
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 86.1
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 82.0
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 80.3
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 79.7
Show allShow less
Colon - Transverse
Average nTPM: 30.2
Samples: 406

Max nTPM: 112.1
Min nTPM: 9.4
Std nTPM: 12.3
Median nTPM: 27.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 112.1
GTEX-14JIY-3326-SM-6871E 60-69 years, male 92.7
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 76.5
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 76.2
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 74.9
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 65.4
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 64.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 62.3
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 62.1
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 62.1
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 61.1
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 6.6
FF:10014-101C5 62,83,84 years, mixed 6.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.