HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.8 nTPM
HPA:46.8 nTPM
GTEx:68.5 nTPM
FANTOM5:91.7 Scaled Tags Per Million
Pig:22.6 nTPM
Mouse:35.2 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069321
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.8
Sample id Sample description nTPM
Hippocampus
nTPM: 46.0
2529 Female, age 94, left hemisphere 47.4
2621 Female, age 67, right hemisphere 47.4
2148 Female, age 91, left hemisphere 46.2
1911 Female, age 85, right hemisphere 45.5
1855 Male, age 76, left hemisphere 45.1
1898 Male, age 80, left hemisphere 44.7
Dentate gyrus
nTPM: 46.7
2531 Female, age 67, both hemispheres 49.5
2530 Female, age 94, left hemisphere 47.2
2246 Female, age 85, both hemispheres 47.1
2010 Male, age 76, both hemispheres 46.2
1927 Female, age 91, both hemispheres 45.4
2528 Male, age 74, both hemispheres 44.6
Entorhinal gyrus
nTPM: 45.0
2764 Male, age 80, right hemisphere 46.3
2686 Male, age 75, right hemisphere 45.8
1787 Male, age 76, left hemisphere 45.3
2117 Female, age 91, right hemisphere 44.5
2613 Female, age 94, left hemisphere 44.4
1938 Female, age 85, left hemisphere 43.9
Hippocampus, CA1
nTPM: 45.8
2082 Female, age 91, right hemisphere 46.5
2749 Male, age 80, left hemisphere 46.5
2045 Male, age 76, both hemispheres 45.7
1873 Female, age 85, both hemispheres 45.4
2527 Male, age 74, both hemispheres 45.1
Hippocampus, CA2
nTPM: 45.0
1892 Male, age 76, both hemispheres 46.8
2437 Female, age 94, left hemisphere 45.3
1940 Female, age 85, left hemisphere 45.0
2249 Male, age 74, both hemispheres 44.8
2113 Female, age 91, right hemisphere 44.0
1963 Male, age 80, left hemisphere 43.8
Hippocampus, CA3
nTPM: 46.8
2861 Female, age 67, both hemispheres 51.3
2137 Male, age 80, left hemisphere 46.8
2620 Female, age 94, left hemisphere 46.5
1867 Male, age 76, both hemispheres 46.0
1891 Female, age 85, both hemispheres 45.4
2436 Male, age 74, both hemispheres 44.9
Parahippocampal cortex
nTPM: 46.3
2622 Female, age 67, right hemisphere 51.8
2692 Male, age 74, both hemispheres 47.8
1850 Male, age 80, both hemispheres 46.5
2532 Female, age 72, left hemisphere 46.2
2245 Female, age 91, both hemispheres 46.1
2250 Female, age 67, right hemisphere 45.9
2018 Male, age 76, both hemispheres 45.2
1933 Female, age 85, both hemispheres 44.8
2693 Female, age 94, both hemispheres 44.7
1990 Female, age 91, right hemisphere 43.8
Perirhinal gyrus
nTPM: 45.3
2848 Male, age 76, right hemisphere 46.6
1794 Male, age 80, right hemisphere 46.3
1841 Female, age 85, right hemisphere 46.0
1847 Female, age 91, left hemisphere 44.0
2521 Female, age 94, right hemisphere 43.8
Subiculum
nTPM: 46.2
2042 Male, age 76, both hemispheres 48.1
1901 Male, age 80, both hemispheres 47.1
2619 Male, age 74, both hemispheres 46.3
1977 Female, age 85, both hemispheres 45.9
2438 Female, age 94, left hemisphere 45.5
2729 Female, age 91, right hemisphere 44.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.5
Samples: 197

Max nTPM: 166.2
Min nTPM: 23.8
Std nTPM: 24.4
Median nTPM: 63.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 166.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 147.6
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 143.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 137.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 136.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 135.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 130.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 126.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 118.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 117.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 108.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 91.7
FF:10169-103B7 60 years, female 97.3
FF:10153-102I9 76 years, female 86.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 25.3
Min nTPM: 18.6
Sample A Female 18.6
Sample B Female 21.2
Sample C Male 19.2
Sample D Male 25.3
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 25.3
Min nTPM: 21.1
Sample A Female 21.1
Sample B Female 22.9
Sample C Male 21.1
Sample D Male 25.3
Subiculum
nTPM: 20.7
Samples: 4

Max nTPM: 21.1
Min nTPM: 20.2
Sample A Female 20.2
Sample B Female 20.8
Sample C Male 21.1
Sample D Male 20.5
Ventral hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 24.7
Min nTPM: 21.0
Sample A Female 21.0
Sample B Female 22.2
Sample C Male 22.3
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 37.0
Min nTPM: 29.8
Sample A Male 29.8
Sample B Male 33.0
Sample C Female 33.6
Sample D Female 37.0
Hippocampal formation
nTPM: 35.2
Samples: 4

Max nTPM: 38.9
Min nTPM: 31.5
Sample A Male 35.9
Sample B Male 38.9
Sample C Female 34.6
Sample D Female 31.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
68080678 Antisense, RP_040929_01_D08, Mouse strain C57BL/6J (56 days, male) 4.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.