HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:53.7 nTPM
HPA:53.7 nTPM
GTEx:101.9 nTPM
FANTOM5:124.3 Scaled Tags Per Million
Pig:122.1 nTPM
Mouse:99.3 nTPM
Allen mouse:14.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034780
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.8
1898 Male, age 80, left hemisphere 60.0
2621 Female, age 67, right hemisphere 57.1
2148 Female, age 91, left hemisphere 42.4
1855 Male, age 76, left hemisphere 42.0
1911 Female, age 85, right hemisphere 40.2
2529 Female, age 94, left hemisphere 33.2
Dentate gyrus
nTPM: 53.7
2530 Female, age 94, left hemisphere 110.2
1927 Female, age 91, both hemispheres 50.2
2528 Male, age 74, both hemispheres 44.8
2531 Female, age 67, both hemispheres 43.8
2010 Male, age 76, both hemispheres 40.1
2246 Female, age 85, both hemispheres 33.2
Entorhinal gyrus
nTPM: 50.6
2613 Female, age 94, left hemisphere 78.8
2764 Male, age 80, right hemisphere 62.8
1938 Female, age 85, left hemisphere 50.1
2686 Male, age 75, right hemisphere 46.5
1787 Male, age 76, left hemisphere 41.1
2117 Female, age 91, right hemisphere 24.2
Hippocampus, CA1
nTPM: 46.4
2749 Male, age 80, left hemisphere 88.9
1873 Female, age 85, both hemispheres 46.3
2527 Male, age 74, both hemispheres 40.0
2082 Female, age 91, right hemisphere 32.4
2045 Male, age 76, both hemispheres 24.4
Hippocampus, CA2
nTPM: 48.0
1963 Male, age 80, left hemisphere 60.6
2437 Female, age 94, left hemisphere 60.4
1892 Male, age 76, both hemispheres 49.9
2249 Male, age 74, both hemispheres 48.0
1940 Female, age 85, left hemisphere 36.9
2113 Female, age 91, right hemisphere 31.9
Hippocampus, CA3
nTPM: 46.4
2861 Female, age 67, both hemispheres 70.6
2137 Male, age 80, left hemisphere 64.0
2620 Female, age 94, left hemisphere 50.1
1867 Male, age 76, both hemispheres 37.8
2436 Male, age 74, both hemispheres 28.5
1891 Female, age 85, both hemispheres 27.3
Parahippocampal cortex
nTPM: 43.5
2622 Female, age 67, right hemisphere 57.4
2245 Female, age 91, both hemispheres 50.0
1990 Female, age 91, right hemisphere 47.2
1850 Male, age 80, both hemispheres 47.1
1933 Female, age 85, both hemispheres 43.1
2250 Female, age 67, right hemisphere 41.8
2693 Female, age 94, both hemispheres 40.8
2692 Male, age 74, both hemispheres 40.0
2532 Female, age 72, left hemisphere 39.0
2018 Male, age 76, both hemispheres 28.0
Perirhinal gyrus
nTPM: 47.6
1847 Female, age 91, left hemisphere 57.4
1794 Male, age 80, right hemisphere 54.7
1841 Female, age 85, right hemisphere 43.7
2521 Female, age 94, right hemisphere 43.2
2848 Male, age 76, right hemisphere 39.2
Subiculum
nTPM: 34.1
1901 Male, age 80, both hemispheres 44.2
1977 Female, age 85, both hemispheres 40.2
2438 Female, age 94, left hemisphere 35.6
2619 Male, age 74, both hemispheres 32.1
2729 Female, age 91, right hemisphere 26.3
2042 Male, age 76, both hemispheres 26.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.9
Samples: 197

Max nTPM: 249.3
Min nTPM: 12.6
Std nTPM: 43.7
Median nTPM: 98.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 249.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 220.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 207.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 198.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 193.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 192.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 186.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 186.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 184.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 181.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 178.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 124.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 124.3
FF:10169-103B7 60 years, female 156.9
FF:10153-102I9 76 years, female 91.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 122.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 108.2
Samples: 4

Max nTPM: 145.1
Min nTPM: 78.2
Sample A Female 145.1
Sample B Female 118.4
Sample C Male 91.0
Sample D Male 78.2
Entorhinal cortex
nTPM: 122.1
Samples: 4

Max nTPM: 134.4
Min nTPM: 108.2
Sample A Female 134.4
Sample B Female 108.2
Sample C Male 132.3
Sample D Male 113.5
Subiculum
nTPM: 106.5
Samples: 4

Max nTPM: 144.1
Min nTPM: 85.0
Sample A Female 144.1
Sample B Female 92.0
Sample C Male 105.0
Sample D Male 85.0
Ventral hippocampus
nTPM: 117.1
Samples: 4

Max nTPM: 146.2
Min nTPM: 74.3
Sample A Female 118.3
Sample B Female 74.3
Sample C Male 146.2
Sample D Male 129.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.7
Samples: 4

Max nTPM: 95.2
Min nTPM: 81.3
Sample A Male 84.2
Sample B Male 81.3
Sample C Female 85.9
Sample D Female 95.2
Hippocampal formation
nTPM: 99.3
Samples: 4

Max nTPM: 105.5
Min nTPM: 91.6
Sample A Male 91.6
Sample B Male 105.5
Sample C Female 101.4
Sample D Female 98.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.7
68148737 Antisense, RP_041116_02_A09, Mouse strain C57BL/6J (56 days, male) 14.7

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