HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.9 nTPM
HPA:18.9 nTPM
GTEx:19.0 nTPM
FANTOM5:58.7 Scaled Tags Per Million
Pig:36.8 nTPM
Mouse:43.8 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030968
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.9
Sample id Sample description nTPM
Hippocampus
nTPM: 17.1
1898 Male, age 80, left hemisphere 21.8
1855 Male, age 76, left hemisphere 19.2
2621 Female, age 67, right hemisphere 17.2
1911 Female, age 85, right hemisphere 15.6
2529 Female, age 94, left hemisphere 15.1
2148 Female, age 91, left hemisphere 14.0
Dentate gyrus
nTPM: 17.4
1927 Female, age 91, both hemispheres 21.1
2010 Male, age 76, both hemispheres 20.8
2246 Female, age 85, both hemispheres 17.5
2528 Male, age 74, both hemispheres 15.6
2530 Female, age 94, left hemisphere 15.4
2531 Female, age 67, both hemispheres 14.0
Entorhinal gyrus
nTPM: 15.3
1938 Female, age 85, left hemisphere 18.7
1787 Male, age 76, left hemisphere 17.0
2764 Male, age 80, right hemisphere 15.6
2117 Female, age 91, right hemisphere 14.5
2613 Female, age 94, left hemisphere 13.9
2686 Male, age 75, right hemisphere 11.9
Hippocampus, CA1
nTPM: 18.8
2749 Male, age 80, left hemisphere 26.7
1873 Female, age 85, both hemispheres 20.0
2045 Male, age 76, both hemispheres 18.5
2527 Male, age 74, both hemispheres 15.4
2082 Female, age 91, right hemisphere 13.6
Hippocampus, CA2
nTPM: 17.7
1892 Male, age 76, both hemispheres 21.8
1963 Male, age 80, left hemisphere 20.6
2249 Male, age 74, both hemispheres 19.4
1940 Female, age 85, left hemisphere 15.2
2437 Female, age 94, left hemisphere 15.2
2113 Female, age 91, right hemisphere 13.8
Hippocampus, CA3
nTPM: 16.7
2137 Male, age 80, left hemisphere 20.9
1867 Male, age 76, both hemispheres 18.8
1891 Female, age 85, both hemispheres 17.3
2436 Male, age 74, both hemispheres 16.1
2620 Female, age 94, left hemisphere 14.8
2861 Female, age 67, both hemispheres 12.1
Parahippocampal cortex
nTPM: 15.9
1850 Male, age 80, both hemispheres 21.9
1990 Female, age 91, right hemisphere 17.5
2250 Female, age 67, right hemisphere 17.0
1933 Female, age 85, both hemispheres 16.9
2018 Male, age 76, both hemispheres 16.3
2245 Female, age 91, both hemispheres 15.9
2693 Female, age 94, both hemispheres 15.3
2532 Female, age 72, left hemisphere 13.9
2692 Male, age 74, both hemispheres 12.9
2622 Female, age 67, right hemisphere 11.9
Perirhinal gyrus
nTPM: 18.9
1847 Female, age 91, left hemisphere 21.2
1841 Female, age 85, right hemisphere 20.3
1794 Male, age 80, right hemisphere 19.5
2848 Male, age 76, right hemisphere 16.8
2521 Female, age 94, right hemisphere 16.5
Subiculum
nTPM: 16.2
2438 Female, age 94, left hemisphere 17.8
1901 Male, age 80, both hemispheres 17.3
1977 Female, age 85, both hemispheres 16.8
2042 Male, age 76, both hemispheres 16.4
2619 Male, age 74, both hemispheres 14.8
2729 Female, age 91, right hemisphere 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 35.1
Min nTPM: 9.9
Std nTPM: 5.0
Median nTPM: 18.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 35.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 33.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 31.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 30.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 30.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 30.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 29.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 29.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 28.6
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 28.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.7
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 49.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 40.5
Min nTPM: 25.4
Sample A Female 40.5
Sample B Female 31.0
Sample C Male 33.0
Sample D Male 25.4
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 42.2
Min nTPM: 30.4
Sample A Female 39.5
Sample B Female 42.2
Sample C Male 35.2
Sample D Male 30.4
Subiculum
nTPM: 35.8
Samples: 4

Max nTPM: 46.5
Min nTPM: 30.2
Sample A Female 46.5
Sample B Female 32.3
Sample C Male 30.2
Sample D Male 34.1
Ventral hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 31.1
Min nTPM: 26.4
Sample A Female 31.1
Sample B Female 26.4
Sample C Male 28.0
Sample D Male 29.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.8
Samples: 4

Max nTPM: 49.1
Min nTPM: 38.4
Sample A Male 43.1
Sample B Male 49.1
Sample C Female 44.6
Sample D Female 38.4
Hippocampal formation
nTPM: 42.2
Samples: 4

Max nTPM: 51.3
Min nTPM: 36.4
Sample A Male 51.3
Sample B Male 40.8
Sample C Female 36.4
Sample D Female 40.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
68637814 Antisense, RP_050126_01_F08, Mouse strain C57BL/6J (56 days, male) 6.6
81599682 Antisense, RP_080104_01_B01, Mouse strain C57BL/6J (56 days, male) 3.6

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The Human Protein Atlas

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