HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:320.5 nTPM
HPA:320.5 nTPM
GTEx:310.8 nTPM
FANTOM5:1106.5 Scaled Tags Per Million
Pig:107.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA078003
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 320.5
Sample id Sample description nTPM
Hippocampus
nTPM: 263.0
2621 Female, age 67, right hemisphere 379.2
1898 Male, age 80, left hemisphere 285.1
2148 Female, age 91, left hemisphere 277.8
1855 Male, age 76, left hemisphere 215.4
2529 Female, age 94, left hemisphere 211.1
1911 Female, age 85, right hemisphere 209.4
Dentate gyrus
nTPM: 238.0
2531 Female, age 67, both hemispheres 375.4
1927 Female, age 91, both hemispheres 359.6
2010 Male, age 76, both hemispheres 192.2
2530 Female, age 94, left hemisphere 179.2
2246 Female, age 85, both hemispheres 166.5
2528 Male, age 74, both hemispheres 154.9
Entorhinal gyrus
nTPM: 195.6
2613 Female, age 94, left hemisphere 297.9
1938 Female, age 85, left hemisphere 214.0
2764 Male, age 80, right hemisphere 196.1
2686 Male, age 75, right hemisphere 195.9
1787 Male, age 76, left hemisphere 178.9
2117 Female, age 91, right hemisphere 91.0
Hippocampus, CA1
nTPM: 317.6
2749 Male, age 80, left hemisphere 586.5
2527 Male, age 74, both hemispheres 343.4
2045 Male, age 76, both hemispheres 252.6
1873 Female, age 85, both hemispheres 228.5
2082 Female, age 91, right hemisphere 177.1
Hippocampus, CA2
nTPM: 236.4
1963 Male, age 80, left hemisphere 556.9
1892 Male, age 76, both hemispheres 260.2
2113 Female, age 91, right hemisphere 232.7
2437 Female, age 94, left hemisphere 169.4
2249 Male, age 74, both hemispheres 104.6
1940 Female, age 85, left hemisphere 94.6
Hippocampus, CA3
nTPM: 320.5
2137 Male, age 80, left hemisphere 628.7
2861 Female, age 67, both hemispheres 455.0
2620 Female, age 94, left hemisphere 319.0
1867 Male, age 76, both hemispheres 241.6
1891 Female, age 85, both hemispheres 145.2
2436 Male, age 74, both hemispheres 133.5
Parahippocampal cortex
nTPM: 208.8
2245 Female, age 91, both hemispheres 373.9
2018 Male, age 76, both hemispheres 236.3
2693 Female, age 94, both hemispheres 230.3
2622 Female, age 67, right hemisphere 215.1
1850 Male, age 80, both hemispheres 207.7
2250 Female, age 67, right hemisphere 198.9
1933 Female, age 85, both hemispheres 169.6
2532 Female, age 72, left hemisphere 154.7
1990 Female, age 91, right hemisphere 154.6
2692 Male, age 74, both hemispheres 147.1
Perirhinal gyrus
nTPM: 270.7
1847 Female, age 91, left hemisphere 338.4
2521 Female, age 94, right hemisphere 322.1
1794 Male, age 80, right hemisphere 270.5
2848 Male, age 76, right hemisphere 215.6
1841 Female, age 85, right hemisphere 206.9
Subiculum
nTPM: 134.9
1901 Male, age 80, both hemispheres 192.0
1977 Female, age 85, both hemispheres 172.1
2729 Female, age 91, right hemisphere 144.6
2619 Male, age 74, both hemispheres 127.8
2042 Male, age 76, both hemispheres 96.8
2438 Female, age 94, left hemisphere 76.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 310.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 310.8
Samples: 197

Max nTPM: 980.1
Min nTPM: 37.2
Std nTPM: 187.8
Median nTPM: 276.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 980.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 885.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 877.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 860.8
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 776.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 767.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 743.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 709.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 688.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 684.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 674.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1106.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1106.5
FF:10169-103B7 60 years, female 1314.2
FF:10153-102I9 76 years, female 898.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 107.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 102.6
Samples: 4

Max nTPM: 115.6
Min nTPM: 83.1
Sample A Female 115.6
Sample B Female 112.4
Sample C Male 83.1
Sample D Male 99.3
Entorhinal cortex
nTPM: 88.5
Samples: 4

Max nTPM: 98.7
Min nTPM: 78.6
Sample A Female 90.1
Sample B Female 78.6
Sample C Male 98.7
Sample D Male 86.7
Subiculum
nTPM: 92.6
Samples: 4

Max nTPM: 119.2
Min nTPM: 77.6
Sample A Female 119.2
Sample B Female 83.1
Sample C Male 90.3
Sample D Male 77.6
Ventral hippocampus
nTPM: 107.9
Samples: 4

Max nTPM: 134.4
Min nTPM: 83.3
Sample A Female 107.2
Sample B Female 83.3
Sample C Male 134.4
Sample D Male 106.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.