AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		45.351
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.7 nTPM
HPA:12.7 nTPM
GTEx:19.3 nTPM
FANTOM5:17.6 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:52.6 nTPM
Allen mouse:12.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA049148
Amygdala mean intensity 45.351
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 30.434
Basal medial amygdaloid nucleus 34.478
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 18.613
Cortical amygdala 27.326
Central amygdala 29.778
Medial amygdaloid nucleus 45.351

AMYGDALA - HPA Brain RNA-seq
Max nTPM 12.7
Sample id Sample description nTPM
Amygdala
nTPM: 5.2
2517 Female, age 94, left hemisphere 7.8
1987 Female, age 91, left hemisphere 7.3
2514 Male, age 75, right hemisphere 4.3
2814 Male, age 76, right hemisphere 3.9
2695 Female, age 67, right hemisphere 2.6
Basal amygdala
nTPM: 10.3
2685 Female, age 94, left hemisphere 15.1
2243 Female, age 91, right hemisphere 13.5
2827 Female, age 67, right hemisphere 13.3
2110 Male, age 80, left hemisphere 10.0
2609 Male, age 75, right hemisphere 5.7
1955 Male, age 76, both hemispheres 4.5
Central amygdala
nTPM: 7.6
2239 Male, age 80, left hemisphere 12.2
2826 Female, age 94, left hemisphere 8.9
2701 Female, age 91, right hemisphere 7.6
2515 Male, age 75, right hemisphere 7.2
1905 Male, age 76, both hemispheres 2.2
Corticomedial amygdala
nTPM: 10.6
2535 Female, age 67, right hemisphere 20.6
2829 Male, age 80, left hemisphere 12.1
2242 Female, age 91, right hemisphere 11.4
2429 Female, age 94, left hemisphere 10.1
2240 Male, age 76, both hemispheres 4.6
2428 Male, age 75, right hemisphere 4.6
Lateral amygdala
nTPM: 7.8
2255 Female, age 91, right hemisphere 11.0
2256 Male, age 80, left hemisphere 9.4
2534 Female, age 94, left hemisphere 8.7
2830 Female, age 67, right hemisphere 7.8
2516 Male, age 75, right hemisphere 5.2
1883 Male, age 76, both hemispheres 4.9
Stria terminalis, bed nucleus
nTPM: 12.7
2486 Female, age 94, both hemispheres 14.9
1974 Female, age 91, both hemispheres 14.8
2201 Male, age 74, unknown 8.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 19.3
Samples: 152

Max nTPM: 53.6
Min nTPM: 4.2
Std nTPM: 7.5
Median nTPM: 18.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 53.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 45.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 43.6
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 37.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 35.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 33.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 33.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 32.3
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 31.3
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 31.0
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 30.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 17.6
FF:10151-102I7 76 years, female 17.6

AMYGDALA - Pig RNA-seqi
Average nTPM 22.8
Pig sample Sample description nTPM
Amygdala
nTPM: 22.8
Samples: 4

Max nTPM: 35.6
Min nTPM: 15.1
Sample A Female 35.6
Sample B Female 15.1
Sample C Male 19.7
Sample D Male 20.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 52.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 52.6
Samples: 4

Max nTPM: 55.1
Min nTPM: 49.7
Sample A Male 51.3
Sample B Male 54.1
Sample C Female 49.7
Sample D Female 55.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 12.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 12.3
69104136 Antisense, RP_050316_02_B01, Mouse strain C57BL/6J (56 days, male) 12.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.