HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.3 nTPM
HPA:59.3 nTPM
GTEx:60.5 nTPM
FANTOM5:7.4 Scaled Tags Per Million
Pig:84.7 nTPM
Mouse:20.2 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005680Antibody HPA050556Antibody CAB033902Antibody CAB062547Antibody CAB068175
Glial cells LowNot detectedNot detectedNot detectedNot detected
Neuronal cells HighNot detectedNot detectedNot detectedNot detected










HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.3
Sample id Sample description nTPM
Hippocampus
nTPM: 42.7
1911 Female, age 85, right hemisphere 50.6
2529 Female, age 94, left hemisphere 49.1
2621 Female, age 67, right hemisphere 49.1
1898 Male, age 80, left hemisphere 39.7
2148 Female, age 91, left hemisphere 34.9
1855 Male, age 76, left hemisphere 32.9
Dentate gyrus
nTPM: 46.2
2530 Female, age 94, left hemisphere 69.1
2528 Male, age 74, both hemispheres 48.4
2010 Male, age 76, both hemispheres 47.2
2246 Female, age 85, both hemispheres 41.6
2531 Female, age 67, both hemispheres 38.5
1927 Female, age 91, both hemispheres 32.2
Entorhinal gyrus
nTPM: 42.2
2117 Female, age 91, right hemisphere 63.0
2764 Male, age 80, right hemisphere 49.5
1938 Female, age 85, left hemisphere 38.2
2686 Male, age 75, right hemisphere 35.9
2613 Female, age 94, left hemisphere 35.4
1787 Male, age 76, left hemisphere 30.8
Hippocampus, CA1
nTPM: 35.6
2527 Male, age 74, both hemispheres 44.9
2082 Female, age 91, right hemisphere 41.4
1873 Female, age 85, both hemispheres 41.0
2749 Male, age 80, left hemisphere 31.9
2045 Male, age 76, both hemispheres 18.8
Hippocampus, CA2
nTPM: 48.3
1963 Male, age 80, left hemisphere 66.2
2249 Male, age 74, both hemispheres 56.0
2437 Female, age 94, left hemisphere 46.4
1940 Female, age 85, left hemisphere 45.3
2113 Female, age 91, right hemisphere 44.8
1892 Male, age 76, both hemispheres 30.9
Hippocampus, CA3
nTPM: 33.4
1891 Female, age 85, both hemispheres 59.8
1867 Male, age 76, both hemispheres 37.8
2436 Male, age 74, both hemispheres 36.3
2137 Male, age 80, left hemisphere 25.8
2861 Female, age 67, both hemispheres 20.6
2620 Female, age 94, left hemisphere 20.1
Parahippocampal cortex
nTPM: 38.0
2532 Female, age 72, left hemisphere 52.1
2692 Male, age 74, both hemispheres 50.2
1990 Female, age 91, right hemisphere 45.9
2018 Male, age 76, both hemispheres 43.5
2245 Female, age 91, both hemispheres 40.2
1850 Male, age 80, both hemispheres 39.7
1933 Female, age 85, both hemispheres 34.0
2693 Female, age 94, both hemispheres 30.8
2250 Female, age 67, right hemisphere 23.2
2622 Female, age 67, right hemisphere 20.6
Perirhinal gyrus
nTPM: 27.6
2521 Female, age 94, right hemisphere 32.5
2848 Male, age 76, right hemisphere 29.6
1794 Male, age 80, right hemisphere 27.1
1847 Female, age 91, left hemisphere 25.6
1841 Female, age 85, right hemisphere 23.1
Subiculum
nTPM: 59.3
2042 Male, age 76, both hemispheres 81.0
1901 Male, age 80, both hemispheres 72.4
2438 Female, age 94, left hemisphere 61.9
1977 Female, age 85, both hemispheres 55.3
2619 Male, age 74, both hemispheres 46.7
2729 Female, age 91, right hemisphere 38.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.5
Samples: 197

Max nTPM: 194.4
Min nTPM: 4.3
Std nTPM: 42.3
Median nTPM: 47.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 194.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 188.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 186.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 176.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 168.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 167.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 159.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 152.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 151.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 150.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 148.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.4
FF:10153-102I9 76 years, female 9.7
FF:10169-103B7 60 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 84.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 84.8
Samples: 4

Max nTPM: 121.7
Min nTPM: 25.2
Sample A Female 119.2
Sample B Female 72.9
Sample C Male 121.7
Sample D Male 25.2
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 38.4
Min nTPM: 12.1
Sample A Female 12.8
Sample B Female 38.4
Sample C Male 12.1
Sample D Male 22.2
Subiculum
nTPM: 29.1
Samples: 4

Max nTPM: 38.9
Min nTPM: 20.4
Sample A Female 27.6
Sample B Female 38.9
Sample C Male 20.4
Sample D Male 29.5
Ventral hippocampus
nTPM: 53.7
Samples: 4

Max nTPM: 75.6
Min nTPM: 31.2
Sample A Female 75.5
Sample B Female 31.2
Sample C Male 32.5
Sample D Male 75.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 5.0
Sample A Male 12.8
Sample B Male 7.7
Sample C Female 13.0
Sample D Female 5.0
Hippocampal formation
nTPM: 20.2
Samples: 4

Max nTPM: 26.5
Min nTPM: 16.5
Sample A Male 18.9
Sample B Male 16.5
Sample C Female 26.5
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
33 Antisense, RP_040324_01_E09, Mouse strain C57BL/6J (56 days, male) 3.0
34 Antisense, RP_040324_01_E09, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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