COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:54.8 nTPM
HPA:30.1 nTPM
GTEx:54.8 nTPM
FANTOM5:54.4 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 30.1
overview
Male, age 54 		Colon sample 67
nTPM: 26.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 29.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 24.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 27.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 25.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 35.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 28.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 30.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 37.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 32.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 31.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 33.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 29
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 54.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 54.8
Samples: 373

Max nTPM: 101.6
Min nTPM: 18.6
Std nTPM: 13.5
Median nTPM: 54.4
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 101.6
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 87.6
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 87.3
GTEX-14E1K-1626-SM-664MO 50-59 years, male 84.2
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 84.2
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 83.7
GTEX-14PK6-1826-SM-69LOM 70-79 years, female 83.1
GTEX-1S831-1726-SM-EWROJ 20-29 years, male 83.1
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 82.5
GTEX-1H3VY-2526-SM-9KNW1 50-59 years, male 81.3
GTEX-1LG7Z-1326-SM-DIPF3 30-39 years, male 81.3
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Colon - Transverse
Average nTPM: 33.6
Samples: 406

Max nTPM: 82.1
Min nTPM: 12.3
Std nTPM: 15.4
Median nTPM: 29.2
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 82.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 73.8
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 73.3
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 73.3
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 72.6
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 72.4
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 71.3
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 70.5
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 70.4
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 69.5
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 68.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 54.4
FF:10014-101C5 62,83,84 years, mixed 54.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.