HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.7 nTPM
HPA:40.7 nTPM
GTEx:30.1 nTPM
FANTOM5:56.2 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:36.9 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046651Antibody CAB046010
Glial cells LowLow
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.7
Sample id Sample description nTPM
Hippocampus
nTPM: 40.6
2529 Female, age 94, left hemisphere 44.0
1898 Male, age 80, left hemisphere 41.5
2148 Female, age 91, left hemisphere 40.6
1911 Female, age 85, right hemisphere 39.6
2621 Female, age 67, right hemisphere 39.2
1855 Male, age 76, left hemisphere 38.6
Dentate gyrus
nTPM: 39.9
2010 Male, age 76, both hemispheres 42.8
2530 Female, age 94, left hemisphere 41.7
2531 Female, age 67, both hemispheres 40.5
1927 Female, age 91, both hemispheres 38.5
2246 Female, age 85, both hemispheres 38.1
2528 Male, age 74, both hemispheres 38.0
Entorhinal gyrus
nTPM: 40.5
1787 Male, age 76, left hemisphere 41.8
2686 Male, age 75, right hemisphere 41.3
1938 Female, age 85, left hemisphere 40.9
2764 Male, age 80, right hemisphere 40.7
2117 Female, age 91, right hemisphere 40.3
2613 Female, age 94, left hemisphere 37.9
Hippocampus, CA1
nTPM: 40.6
2749 Male, age 80, left hemisphere 42.3
2045 Male, age 76, both hemispheres 40.7
1873 Female, age 85, both hemispheres 40.0
2082 Female, age 91, right hemisphere 39.9
2527 Male, age 74, both hemispheres 39.9
Hippocampus, CA2
nTPM: 40.2
2249 Male, age 74, both hemispheres 41.6
1892 Male, age 76, both hemispheres 41.1
1940 Female, age 85, left hemisphere 40.5
1963 Male, age 80, left hemisphere 39.7
2113 Female, age 91, right hemisphere 39.5
2437 Female, age 94, left hemisphere 39.1
Hippocampus, CA3
nTPM: 39.6
2137 Male, age 80, left hemisphere 42.4
2861 Female, age 67, both hemispheres 40.3
1867 Male, age 76, both hemispheres 39.9
2620 Female, age 94, left hemisphere 39.9
1891 Female, age 85, both hemispheres 38.6
2436 Male, age 74, both hemispheres 36.6
Parahippocampal cortex
nTPM: 40.6
2532 Female, age 72, left hemisphere 43.4
2018 Male, age 76, both hemispheres 42.3
2245 Female, age 91, both hemispheres 42.2
1850 Male, age 80, both hemispheres 41.8
1933 Female, age 85, both hemispheres 40.8
2622 Female, age 67, right hemisphere 40.3
1990 Female, age 91, right hemisphere 39.6
2250 Female, age 67, right hemisphere 39.0
2692 Male, age 74, both hemispheres 38.9
2693 Female, age 94, both hemispheres 38.1
Perirhinal gyrus
nTPM: 40.7
1794 Male, age 80, right hemisphere 43.3
1841 Female, age 85, right hemisphere 41.6
2848 Male, age 76, right hemisphere 40.4
1847 Female, age 91, left hemisphere 39.3
2521 Female, age 94, right hemisphere 39.2
Subiculum
nTPM: 39.2
1901 Male, age 80, both hemispheres 40.8
2042 Male, age 76, both hemispheres 40.2
1977 Female, age 85, both hemispheres 38.9
2438 Female, age 94, left hemisphere 38.7
2729 Female, age 91, right hemisphere 38.6
2619 Male, age 74, both hemispheres 37.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.1
Samples: 197

Max nTPM: 74.0
Min nTPM: 18.9
Std nTPM: 6.5
Median nTPM: 29.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 74.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 49.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 49.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 44.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 44.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 43.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 42.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 41.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 41.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.2
FF:10153-102I9 76 years, female 73.8
FF:10169-103B7 60 years, female 38.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 21.2
Min nTPM: 13.2
Sample A Female 21.2
Sample B Female 18.2
Sample C Male 17.9
Sample D Male 13.2
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 19.8
Min nTPM: 18.9
Sample A Female 19.8
Sample B Female 18.9
Sample C Male 19.3
Sample D Male 19.0
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 21.2
Min nTPM: 15.1
Sample A Female 21.2
Sample B Female 17.0
Sample C Male 16.5
Sample D Male 15.1
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.8
Min nTPM: 14.1
Sample A Female 17.5
Sample B Female 14.1
Sample C Male 21.8
Sample D Male 19.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.9
Samples: 4

Max nTPM: 40.4
Min nTPM: 35.3
Sample A Male 35.7
Sample B Male 40.4
Sample C Female 35.3
Sample D Female 36.3
Hippocampal formation
nTPM: 31.8
Samples: 4

Max nTPM: 32.2
Min nTPM: 30.7
Sample A Male 30.7
Sample B Male 32.2
Sample C Female 32.1
Sample D Female 32.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
76081027 Antisense, RP_060608_03_D02, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.