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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:424.1 nTPM
HPA:424.1 nTPM
GTEx:917.4 nTPM
FANTOM5:2515.6 Scaled Tags Per Million
Pig:309.8 nTPM
Mouse:688.3 nTPM
Allen mouse:20.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA023676
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 424.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 356.5
1857 Female, age 85, left hemisphere 487.8
2290 Female, age 72, unknown 434.4
2289 Male, age 61, right hemisphere 404.9
1854 Male, age 80, left hemisphere 366.6
2846 Female, age 79, unknown 347.2
1781 Male, age 74, unknown 345.2
2288 Male, age 75, left hemisphere 281.8
2481 Female, age 94, left hemisphere 184.3
Claustrum
nTPM: 151.6
2491 Male, age 75, both hemispheres 211.1
2284 Female, age 91, both hemispheres 187.5
2568 Male, age 61, both hemispheres 168.5
2196 Female, age 79, unknown 168.3
2198 Male, age 80, both hemispheres 154.8
2392 Female, age 94, both hemispheres 152.1
2645 Female, age 72, unknown 136.8
1956 Male, age 74, unknown 104.4
2292 Female, age 85, both hemispheres 80.9
Globus pallidus, externus
nTPM: 28.1
2646 Male, age 61, right hemisphere 52.6
2395 Male, age 75, both hemispheres 38.3
2772 Female, age 79, unknown 35.5
2567 Female, age 72, unknown 14.1
1996 Male, age 80, right hemisphere 0.0
Globus pallidus, internus
nTPM: 24.3
2483 Female, age 94, right hemisphere 101.6
1818 Male, age 74, unknown 30.8
2287 Male, age 75, right hemisphere 19.1
2566 Female, age 72, unknown 11.4
2037 Male, age 80, right hemisphere 6.1
2778 Female, age 91, both hemispheres 0.8
2111 Female, age 85, right hemisphere 0.0
Nucleus accumbens
nTPM: 424.1
1856 Female, age 91, right hemisphere 752.5
2824 Male, age 61, right hemisphere 640.7
1783 Male, age 74, unknown 593.8
1806 Female, age 85, left hemisphere 521.6
2698 Female, age 72, unknown 323.7
2286 Male, age 75, left hemisphere 286.1
2391 Female, age 94, left hemisphere 142.6
2732 Male, age 80, right hemisphere 131.6
Nucleus basalis of Meynert
nTPM: 198.9
2484 Female, age 94, left hemisphere 315.3
2393 Male, age 80, right hemisphere 255.4
2821 Male, age 75, both hemispheres 148.9
2569 Male, age 61, both hemispheres 76.0
Nucleus of the diagonal band
nTPM: 186.7
1979 Male, age 74, unknown 244.0
1812 Female, age 91, both hemispheres 213.4
2029 Male, age 61, right hemisphere 175.6
2775 Male, age 80, right hemisphere 153.6
2195 Female, age 85, both hemispheres 146.7
Olfactory tubercle
nTPM: 176.5
1998 Female, age 91, both hemispheres 238.5
2856 Male, age 75, right hemisphere 166.2
2487 Female, age 94, left hemisphere 161.6
1846 Male, age 80, right hemisphere 139.8
Putamen
nTPM: 344.8
1937 Female, age 91, right hemisphere 555.4
1838 Male, age 80, right hemisphere 495.1
2466 Female, age 79, unknown 366.6
1829 Male, age 74, unknown 357.0
2482 Female, age 94, left hemisphere 227.2
2489 Female, age 72, unknown 225.4
2647 Male, age 75, left hemisphere 187.1
Septal nuclei
nTPM: 156.6
2009 Female, age 91, both hemispheres 182.5
2031 Female, age 72, unknown 179.8
1960 Male, age 74, unknown 179.0
2199 Male, age 80, right hemisphere 145.6
2059 Female, age 85, both hemispheres 143.7
2394 Male, age 61, left hemisphere 137.9
2629 Female, age 94, right hemisphere 127.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 917.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 617.2
Samples: 246

Max nTPM: 1652.6
Min nTPM: 63.1
Std nTPM: 351.7
Median nTPM: 592.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1652.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1609.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1376.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1366.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1326.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1310.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1304.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1288.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1281.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1278.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1240.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1239.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1238.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1235.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1226.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1219.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1214.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1205.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1172.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1169.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1166.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1150.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1150.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1146.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1145.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1132.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1130.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1127.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1099.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1069.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1064.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1062.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1062.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1059.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1039.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1034.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1021.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1018.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 999.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 997.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 959.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 955.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 955.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 954.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 951.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 950.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 947.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 943.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 934.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 931.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 906.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 906.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 905.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 903.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 901.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 896.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 890.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 889.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 882.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 881.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 880.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 875.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 873.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 869.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 863.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 854.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 850.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 843.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 837.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 837.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 836.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 822.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 816.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 815.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 802.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 801.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 800.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 792.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 788.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 774.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 774.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 772.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 763.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 754.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 752.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 749.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 745.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 744.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 741.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 739.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 738.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 734.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 727.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 724.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 711.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 704.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 703.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 702.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 698.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 681.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 679.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 673.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 671.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 669.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 665.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 656.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 649.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 648.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 644.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 644.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 642.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 639.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 632.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 631.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 616.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 610.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 608.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 603.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 600.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 599.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 597.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 595.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 594.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 590.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 575.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 573.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 572.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 568.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 563.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 552.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 548.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 547.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 546.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 541.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 539.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 536.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 534.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 534.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 532.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 532.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 531.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 529.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 513.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 505.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 500.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 496.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 493.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 492.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 491.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 482.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 477.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 471.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 469.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 457.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 454.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 453.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 451.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 444.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 442.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 442.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 438.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 428.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 427.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 419.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 408.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 407.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 404.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 400.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 378.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 375.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 368.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 364.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 363.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 349.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 342.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 341.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 338.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 332.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 331.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 330.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 328.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 320.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 308.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 303.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 298.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 296.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 293.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 289.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 287.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 280.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 279.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 278.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 277.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 277.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 274.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 266.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 258.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 255.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 253.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 251.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 242.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 241.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 236.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 233.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 232.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 232.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 224.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 223.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 220.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 213.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 212.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 210.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 208.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 198.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 197.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 192.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 190.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 186.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 182.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 182.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 181.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 180.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 177.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 171.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 169.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 167.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 162.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 154.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 150.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 150.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 146.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 142.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 139.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 135.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 133.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 130.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 122.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 117.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 115.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 115.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 101.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 76.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 69.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 66.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 66.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 63.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 917.4
Samples: 246

Max nTPM: 2066.0
Min nTPM: 26.6
Std nTPM: 486.3
Median nTPM: 1000.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2066.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1932.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1872.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1843.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1842.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1841.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1797.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1758.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1731.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1730.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1676.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1672.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1664.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1651.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1639.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1631.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1629.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1619.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1602.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1602.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1587.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1560.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1524.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1510.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1495.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1491.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1485.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1481.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1468.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1466.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1461.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1438.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1434.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1432.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1431.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1424.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1421.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1419.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1412.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1407.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1400.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1393.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1390.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1381.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1380.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1379.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1372.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1370.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1369.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1369.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1360.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 1357.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1351.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1348.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1339.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1337.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1327.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1324.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1322.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1321.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1319.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1319.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1304.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1296.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1294.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1279.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1275.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1251.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1251.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1248.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1244.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1240.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1219.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1218.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1214.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1213.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1206.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1203.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1183.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1178.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 1178.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1172.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1170.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1164.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1159.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1156.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1149.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1147.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1147.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1146.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1144.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1140.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1138.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1137.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1117.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1113.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 1106.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 1103.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1103.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1094.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1092.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1084.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1077.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1075.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1064.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1058.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1056.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1056.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1053.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 1051.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1045.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1038.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1037.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 1034.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 1029.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 1025.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1020.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 1018.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 1012.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 1003.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 1003.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1003.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1001.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 999.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 983.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 961.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 961.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 958.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 954.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 953.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 942.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 937.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 933.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 894.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 891.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 891.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 886.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 886.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 884.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 876.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 876.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 876.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 856.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 845.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 841.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 840.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 826.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 825.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 824.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 817.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 788.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 783.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 768.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 766.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 759.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 757.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 753.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 750.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 748.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 748.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 744.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 744.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 730.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 721.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 715.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 709.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 698.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 697.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 693.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 672.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 654.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 630.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 610.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 610.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 591.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 571.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 562.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 533.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 517.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 508.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 503.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 491.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 487.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 478.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 474.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 471.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 463.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 426.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 425.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 424.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 423.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 412.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 411.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 409.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 401.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 398.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 379.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 376.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 372.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 361.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 358.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 345.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 344.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 332.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 330.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 310.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 309.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 306.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 303.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 288.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 286.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 279.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 275.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 272.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 267.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 265.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 261.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 257.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 241.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 230.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 227.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 216.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 211.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 205.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 204.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 190.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 179.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 172.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 171.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 148.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 145.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 142.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 138.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 134.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 132.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 103.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 100.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 85.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 85.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 78.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 72.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 64.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 58.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 54.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 44.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 26.6
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Brain - Putamen (basal ganglia)
Average nTPM: 561.4
Samples: 205

Max nTPM: 1439.4
Min nTPM: 44.0
Std nTPM: 338.0
Median nTPM: 528.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1439.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1396.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1364.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1301.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1233.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1217.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1214.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1201.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1189.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1181.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1161.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1152.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1120.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1116.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1106.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1041.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1031.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1030.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1019.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1000.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 993.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 992.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 992.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 982.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 979.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 973.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 968.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 965.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 959.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 951.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 949.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 939.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 936.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 927.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 927.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 920.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 918.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 917.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 917.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 914.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 913.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 897.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 892.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 883.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 877.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 874.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 864.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 863.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 861.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 858.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 856.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 848.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 847.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 841.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 813.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 803.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 788.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 781.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 776.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 766.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 762.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 756.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 750.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 734.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 734.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 732.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 731.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 724.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 721.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 719.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 710.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 709.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 700.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 698.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 687.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 667.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 665.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 664.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 660.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 656.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 655.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 653.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 649.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 637.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 633.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 631.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 628.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 628.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 627.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 610.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 607.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 606.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 586.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 583.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 572.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 561.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 555.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 547.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 541.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 539.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 529.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 528.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 528.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 516.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 515.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 511.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 510.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 510.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 504.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 492.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 487.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 482.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 480.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 477.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 460.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 458.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 450.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 445.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 439.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 438.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 435.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 430.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 427.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 419.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 415.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 390.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 382.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 381.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 379.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 377.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 376.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 375.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 371.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 370.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 351.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 349.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 331.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 324.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 318.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 311.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 311.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 309.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 308.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 305.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 291.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 284.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 280.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 277.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 277.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 275.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 275.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 271.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 267.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 264.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 254.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 252.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 249.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 238.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 238.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 229.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 221.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 221.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 214.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 211.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 204.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 201.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 198.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 197.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 197.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 186.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 185.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 184.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 178.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 177.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 174.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 172.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 172.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 171.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 166.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 165.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 163.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 157.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 153.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 152.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 150.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 145.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 142.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 133.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 131.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 128.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 126.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 109.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 108.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 107.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 105.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 104.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 101.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 100.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 98.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 85.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 80.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 74.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 64.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 52.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 44.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 2515.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1634.7
FF:10164-103B2 76 years, female 1634.7
Globus pallidus
Scaled Tags Per Million: 488.4
FF:10175-103C4 60 years, female 790.9
FF:10161-103A8 76 years, female 185.9
Nucleus accumbens
Scaled Tags Per Million: 1326.8
FF:10037-101F1 23-56 years, mixed 1326.8
Putamen
Scaled Tags Per Million: 2515.6
FF:10176-103C5 60 years, female 2515.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 309.8
Pig sample Sample description nTPM
Caudate
nTPM: 309.8
Samples: 4

Max nTPM: 382.7
Min nTPM: 205.1
Sample A Female 205.1
Sample B Female 324.6
Sample C Male 382.7
Sample D Male 326.9
Putamen
nTPM: 284.0
Samples: 4

Max nTPM: 420.9
Min nTPM: 107.9
Sample A Female 107.9
Sample B Female 267.0
Sample C Male 420.9
Sample D Male 340.0
Septum
nTPM: 223.9
Samples: 4

Max nTPM: 276.9
Min nTPM: 119.0
Sample A Female 276.9
Sample B Female 249.3
Sample C Male 119.0
Sample D Male 250.2
Ventral pallidum
nTPM: 222.2
Samples: 4

Max nTPM: 306.6
Min nTPM: 159.9
Sample A Female 306.6
Sample B Female 194.8
Sample C Male 159.9
Sample D Male 227.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 688.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 688.3
Samples: 4

Max nTPM: 826.9
Min nTPM: 578.1
Sample A Male 715.8
Sample B Male 826.9
Sample C Female 578.1
Sample D Female 632.2
Septum
nTPM: 581.4
Samples: 4

Max nTPM: 661.5
Min nTPM: 503.6
Sample A Male 503.6
Sample B Male 645.7
Sample C Female 514.8
Sample D Female 661.5
Ventral forebrain
nTPM: 496.7
Samples: 4

Max nTPM: 544.6
Min nTPM: 452.6
Sample A Male 494.0
Sample B Male 452.6
Sample C Female 544.6
Sample D Female 495.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 20.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 20.8
685 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 20.8
684 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 20.8
Pallidum
Expression energy: 17.3
685 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 17.3
684 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 15.7

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