HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.3 nTPM
HPA:26.3 nTPM
GTEx:79.0 nTPM
FANTOM5:85.5 Scaled Tags Per Million
Pig:24.9 nTPM
Mouse:48.2 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039223Antibody HPA040781
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.3
Sample id Sample description nTPM
Hippocampus
nTPM: 24.3
2529 Female, age 94, left hemisphere 26.5
1911 Female, age 85, right hemisphere 25.8
1898 Male, age 80, left hemisphere 25.7
2621 Female, age 67, right hemisphere 23.0
2148 Female, age 91, left hemisphere 22.7
1855 Male, age 76, left hemisphere 22.2
Dentate gyrus
nTPM: 24.6
2530 Female, age 94, left hemisphere 30.4
2528 Male, age 74, both hemispheres 27.0
2010 Male, age 76, both hemispheres 26.8
2246 Female, age 85, both hemispheres 21.3
2531 Female, age 67, both hemispheres 21.0
1927 Female, age 91, both hemispheres 20.9
Entorhinal gyrus
nTPM: 26.3
2117 Female, age 91, right hemisphere 34.9
2764 Male, age 80, right hemisphere 30.3
1787 Male, age 76, left hemisphere 24.4
2613 Female, age 94, left hemisphere 24.1
1938 Female, age 85, left hemisphere 23.3
2686 Male, age 75, right hemisphere 20.7
Hippocampus, CA1
nTPM: 23.1
2749 Male, age 80, left hemisphere 26.0
2527 Male, age 74, both hemispheres 25.8
2082 Female, age 91, right hemisphere 23.6
1873 Female, age 85, both hemispheres 20.9
2045 Male, age 76, both hemispheres 19.1
Hippocampus, CA2
nTPM: 25.4
2249 Male, age 74, both hemispheres 30.8
1963 Male, age 80, left hemisphere 29.6
2437 Female, age 94, left hemisphere 24.5
1940 Female, age 85, left hemisphere 24.3
2113 Female, age 91, right hemisphere 23.0
1892 Male, age 76, both hemispheres 20.0
Hippocampus, CA3
nTPM: 22.7
2436 Male, age 74, both hemispheres 26.1
1891 Female, age 85, both hemispheres 24.8
2620 Female, age 94, left hemisphere 23.9
1867 Male, age 76, both hemispheres 22.5
2137 Male, age 80, left hemisphere 21.1
2861 Female, age 67, both hemispheres 17.7
Parahippocampal cortex
nTPM: 21.5
1990 Female, age 91, right hemisphere 25.0
2245 Female, age 91, both hemispheres 24.3
2532 Female, age 72, left hemisphere 23.0
2018 Male, age 76, both hemispheres 22.6
2692 Male, age 74, both hemispheres 22.1
1933 Female, age 85, both hemispheres 21.8
1850 Male, age 80, both hemispheres 20.4
2250 Female, age 67, right hemisphere 20.4
2693 Female, age 94, both hemispheres 18.7
2622 Female, age 67, right hemisphere 16.8
Perirhinal gyrus
nTPM: 20.3
1794 Male, age 80, right hemisphere 22.7
2521 Female, age 94, right hemisphere 22.4
1847 Female, age 91, left hemisphere 20.4
2848 Male, age 76, right hemisphere 18.5
1841 Female, age 85, right hemisphere 17.5
Subiculum
nTPM: 25.6
2042 Male, age 76, both hemispheres 28.9
1901 Male, age 80, both hemispheres 28.7
1977 Female, age 85, both hemispheres 27.6
2729 Female, age 91, right hemisphere 24.7
2619 Male, age 74, both hemispheres 24.6
2438 Female, age 94, left hemisphere 19.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.0
Samples: 197

Max nTPM: 188.6
Min nTPM: 33.5
Std nTPM: 26.6
Median nTPM: 73.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 188.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 179.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 176.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 158.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 152.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 140.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 134.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 132.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 129.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 128.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 128.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.5
FF:10169-103B7 60 years, female 85.8
FF:10153-102I9 76 years, female 85.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 33.4
Min nTPM: 16.0
Sample A Female 33.4
Sample B Female 22.2
Sample C Male 27.9
Sample D Male 16.0
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 20.9
Min nTPM: 14.5
Sample A Female 17.8
Sample B Female 20.9
Sample C Male 19.9
Sample D Male 14.5
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 24.8
Min nTPM: 16.6
Sample A Female 24.8
Sample B Female 20.4
Sample C Male 19.2
Sample D Male 16.6
Ventral hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 31.2
Min nTPM: 17.0
Sample A Female 25.8
Sample B Female 17.0
Sample C Male 31.2
Sample D Male 22.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.7
Samples: 4

Max nTPM: 41.3
Min nTPM: 33.5
Sample A Male 38.7
Sample B Male 37.1
Sample C Female 41.3
Sample D Female 33.5
Hippocampal formation
nTPM: 48.2
Samples: 4

Max nTPM: 54.0
Min nTPM: 42.8
Sample A Male 47.5
Sample B Male 42.8
Sample C Female 48.6
Sample D Female 54.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
74800925 Antisense, RP_060315_02_A09, Mouse strain C57BL/6J (56 days, male) 1.8
413828 Antisense, RP_040809_01_H06, Mouse strain C57BL/6J (56 days, male) 0.9

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