COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:39.9 nTPM
HPA:39.9 nTPM
GTEx:24.9 nTPM
FANTOM5:91.8 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 39.9
overview
Male, age 54 		Colon sample 67
nTPM: 40.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 39.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 36.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 44.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 24.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 35.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 48.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 46.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 31
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 53.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 44.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 37.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 36.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 18.5
Samples: 373

Max nTPM: 43.0
Min nTPM: 9.8
Std nTPM: 3.8
Median nTPM: 18.0
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 43.0
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 40.7
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 34.7
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 32.3
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 31.6
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 29.2
GTEX-1CAMS-2626-SM-7PBY3 40-49 years, female 28.9
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 28.6
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 28.4
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 27.3
GTEX-13113-1426-SM-5EGHU 60-69 years, female 26.9
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Colon - Transverse
Average nTPM: 24.9
Samples: 406

Max nTPM: 72.6
Min nTPM: 10.7
Std nTPM: 10.4
Median nTPM: 21.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 72.6
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 67.8
GTEX-1C475-1626-SM-731FP 40-49 years, female 59.7
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 58.1
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 57.5
GTEX-ZLWG-1726-SM-DNZZ2 50-59 years, female 57.2
GTEX-1B8KE-1926-SM-731EE 50-59 years, male 56.9
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 52.5
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 51.6
GTEX-1LG7Z-1426-SM-CXKYV 30-39 years, male 50.5
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 50.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 91.8
FF:10014-101C5 62,83,84 years, mixed 91.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.