HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:49.5 nTPM
HPA:49.5 nTPM
GTEx:34.0 nTPM
FANTOM5:31.9 Scaled Tags Per Million
Pig:39.3 nTPM
Mouse:54.0 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.5
Sample id Sample description nTPM
Hippocampus
nTPM: 49.5
2621 Female, age 67, right hemisphere 50.6
1898 Male, age 80, left hemisphere 50.3
2148 Female, age 91, left hemisphere 50.3
2529 Female, age 94, left hemisphere 49.7
1911 Female, age 85, right hemisphere 48.8
1855 Male, age 76, left hemisphere 47.3
Dentate gyrus
nTPM: 47.8
1927 Female, age 91, both hemispheres 49.3
2010 Male, age 76, both hemispheres 49.0
2531 Female, age 67, both hemispheres 48.0
2530 Female, age 94, left hemisphere 47.4
2246 Female, age 85, both hemispheres 46.6
2528 Male, age 74, both hemispheres 46.6
Entorhinal gyrus
nTPM: 48.9
1787 Male, age 76, left hemisphere 49.7
2764 Male, age 80, right hemisphere 49.6
2686 Male, age 75, right hemisphere 49.2
2613 Female, age 94, left hemisphere 48.8
2117 Female, age 91, right hemisphere 48.0
1938 Female, age 85, left hemisphere 47.8
Hippocampus, CA1
nTPM: 48.7
2749 Male, age 80, left hemisphere 52.7
2045 Male, age 76, both hemispheres 48.3
1873 Female, age 85, both hemispheres 47.9
2527 Male, age 74, both hemispheres 47.6
2082 Female, age 91, right hemisphere 46.8
Hippocampus, CA2
nTPM: 49.0
1940 Female, age 85, left hemisphere 51.6
1892 Male, age 76, both hemispheres 50.3
2437 Female, age 94, left hemisphere 48.9
1963 Male, age 80, left hemisphere 48.7
2113 Female, age 91, right hemisphere 48.3
2249 Male, age 74, both hemispheres 46.5
Hippocampus, CA3
nTPM: 49.0
2137 Male, age 80, left hemisphere 52.5
1867 Male, age 76, both hemispheres 52.3
2861 Female, age 67, both hemispheres 50.0
1891 Female, age 85, both hemispheres 47.4
2620 Female, age 94, left hemisphere 47.0
2436 Male, age 74, both hemispheres 44.9
Parahippocampal cortex
nTPM: 49.3
2622 Female, age 67, right hemisphere 52.7
2245 Female, age 91, both hemispheres 51.0
2250 Female, age 67, right hemisphere 50.0
2018 Male, age 76, both hemispheres 49.8
1990 Female, age 91, right hemisphere 48.8
2532 Female, age 72, left hemisphere 48.7
1933 Female, age 85, both hemispheres 48.6
1850 Male, age 80, both hemispheres 48.1
2693 Female, age 94, both hemispheres 48.1
2692 Male, age 74, both hemispheres 47.6
Perirhinal gyrus
nTPM: 48.9
2521 Female, age 94, right hemisphere 50.0
1847 Female, age 91, left hemisphere 48.7
1794 Male, age 80, right hemisphere 48.6
2848 Male, age 76, right hemisphere 48.6
1841 Female, age 85, right hemisphere 48.5
Subiculum
nTPM: 49.4
2619 Male, age 74, both hemispheres 50.5
1901 Male, age 80, both hemispheres 50.3
2438 Female, age 94, left hemisphere 50.0
2042 Male, age 76, both hemispheres 48.9
2729 Female, age 91, right hemisphere 48.9
1977 Female, age 85, both hemispheres 48.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.0
Samples: 197

Max nTPM: 123.8
Min nTPM: 11.6
Std nTPM: 14.5
Median nTPM: 30.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 123.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 83.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 79.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 69.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 67.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 64.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 64.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 61.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 60.1
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 59.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 58.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.9
FF:10153-102I9 76 years, female 33.5
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 43.3
Min nTPM: 27.6
Sample A Female 35.2
Sample B Female 27.6
Sample C Male 43.3
Sample D Male 27.7
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 47.0
Min nTPM: 31.2
Sample A Female 39.6
Sample B Female 47.0
Sample C Male 39.4
Sample D Male 31.2
Subiculum
nTPM: 32.6
Samples: 4

Max nTPM: 44.8
Min nTPM: 28.2
Sample A Female 44.8
Sample B Female 28.2
Sample C Male 28.2
Sample D Male 29.0
Ventral hippocampus
nTPM: 27.8
Samples: 4

Max nTPM: 33.4
Min nTPM: 22.4
Sample A Female 22.4
Sample B Female 24.5
Sample C Male 33.4
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.0
Samples: 4

Max nTPM: 68.3
Min nTPM: 41.3
Sample A Male 61.5
Sample B Male 68.3
Sample C Female 44.8
Sample D Female 41.3
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 37.3
Min nTPM: 30.5
Sample A Male 33.0
Sample B Male 31.0
Sample C Female 30.5
Sample D Female 37.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69407248 Antisense, RP_050414_01_C01, Mouse strain C57BL/6J (56 days, male) 3.1

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