HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.5 nTPM
HPA:54.5 nTPM
GTEx:46.0 nTPM
FANTOM5:48.2 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:9.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000271Antibody CAB022159
Glial cells Not detectedHigh
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.5
Sample id Sample description nTPM
Hippocampus
nTPM: 45.2
2529 Female, age 94, left hemisphere 49.5
2621 Female, age 67, right hemisphere 47.9
1855 Male, age 76, left hemisphere 47.0
1911 Female, age 85, right hemisphere 43.9
1898 Male, age 80, left hemisphere 42.0
2148 Female, age 91, left hemisphere 40.8
Dentate gyrus
nTPM: 45.3
2530 Female, age 94, left hemisphere 56.8
2010 Male, age 76, both hemispheres 54.9
2531 Female, age 67, both hemispheres 46.2
2246 Female, age 85, both hemispheres 41.1
2528 Male, age 74, both hemispheres 38.8
1927 Female, age 91, both hemispheres 33.7
Entorhinal gyrus
nTPM: 54.1
2686 Male, age 75, right hemisphere 69.3
2117 Female, age 91, right hemisphere 60.0
2613 Female, age 94, left hemisphere 53.4
2764 Male, age 80, right hemisphere 52.0
1787 Male, age 76, left hemisphere 45.2
1938 Female, age 85, left hemisphere 44.9
Hippocampus, CA1
nTPM: 42.2
2082 Female, age 91, right hemisphere 45.5
2045 Male, age 76, both hemispheres 42.8
2527 Male, age 74, both hemispheres 42.5
1873 Female, age 85, both hemispheres 40.5
2749 Male, age 80, left hemisphere 39.6
Hippocampus, CA2
nTPM: 44.3
1963 Male, age 80, left hemisphere 50.4
2113 Female, age 91, right hemisphere 48.3
2437 Female, age 94, left hemisphere 47.9
1940 Female, age 85, left hemisphere 41.7
2249 Male, age 74, both hemispheres 40.8
1892 Male, age 76, both hemispheres 36.7
Hippocampus, CA3
nTPM: 38.9
1891 Female, age 85, both hemispheres 51.9
1867 Male, age 76, both hemispheres 43.3
2861 Female, age 67, both hemispheres 40.4
2137 Male, age 80, left hemisphere 35.3
2436 Male, age 74, both hemispheres 32.9
2620 Female, age 94, left hemisphere 29.4
Parahippocampal cortex
nTPM: 45.8
2692 Male, age 74, both hemispheres 58.1
2018 Male, age 76, both hemispheres 51.3
2532 Female, age 72, left hemisphere 51.1
2622 Female, age 67, right hemisphere 48.7
1990 Female, age 91, right hemisphere 46.0
1850 Male, age 80, both hemispheres 45.3
2245 Female, age 91, both hemispheres 42.1
1933 Female, age 85, both hemispheres 41.1
2693 Female, age 94, both hemispheres 38.9
2250 Female, age 67, right hemisphere 35.8
Perirhinal gyrus
nTPM: 37.7
2848 Male, age 76, right hemisphere 41.4
1847 Female, age 91, left hemisphere 40.1
1794 Male, age 80, right hemisphere 38.0
1841 Female, age 85, right hemisphere 35.0
2521 Female, age 94, right hemisphere 33.9
Subiculum
nTPM: 54.5
2042 Male, age 76, both hemispheres 65.8
2438 Female, age 94, left hemisphere 63.2
1901 Male, age 80, both hemispheres 55.7
1977 Female, age 85, both hemispheres 49.3
2619 Male, age 74, both hemispheres 47.3
2729 Female, age 91, right hemisphere 45.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.0
Samples: 197

Max nTPM: 166.6
Min nTPM: 13.2
Std nTPM: 24.9
Median nTPM: 39.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 166.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 134.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 122.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 111.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 110.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 106.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 103.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 102.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 100.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 99.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 99.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.2
FF:10153-102I9 76 years, female 74.5
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 18.7
Min nTPM: 10.2
Sample A Female 18.7
Sample B Female 11.8
Sample C Male 17.2
Sample D Male 10.2
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 7.6
Min nTPM: 7.1
Sample A Female 7.5
Sample B Female 7.1
Sample C Male 7.6
Sample D Male 7.1
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.5
Sample A Female 11.1
Sample B Female 8.8
Sample C Male 8.5
Sample D Male 9.1
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 12.7
Min nTPM: 7.1
Sample A Female 10.5
Sample B Female 7.1
Sample C Male 12.5
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 11.6
Min nTPM: 7.7
Sample A Male 8.6
Sample B Male 7.7
Sample C Female 8.2
Sample D Female 11.6
Hippocampal formation
nTPM: 6.9
Samples: 4

Max nTPM: 7.4
Min nTPM: 6.5
Sample A Male 7.4
Sample B Male 7.0
Sample C Female 6.7
Sample D Female 6.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69672701 Antisense, RP_050428_04_C12, Mouse strain C57BL/6J (56 days, male) 0.4

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