HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.7 nTPM
HPA:22.7 nTPM
GTEx:18.5 nTPM
FANTOM5:9.2 Scaled Tags Per Million
Pig:72.8 nTPM
Mouse:41.4 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052410
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.7
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
2621 Female, age 67, right hemisphere 24.6
1855 Male, age 76, left hemisphere 22.7
1898 Male, age 80, left hemisphere 22.7
2529 Female, age 94, left hemisphere 20.8
2148 Female, age 91, left hemisphere 20.5
1911 Female, age 85, right hemisphere 19.6
Dentate gyrus
nTPM: 19.9
2010 Male, age 76, both hemispheres 21.1
2246 Female, age 85, both hemispheres 20.6
1927 Female, age 91, both hemispheres 20.5
2531 Female, age 67, both hemispheres 19.7
2530 Female, age 94, left hemisphere 19.6
2528 Male, age 74, both hemispheres 17.7
Entorhinal gyrus
nTPM: 20.3
2686 Male, age 75, right hemisphere 21.6
2613 Female, age 94, left hemisphere 21.0
2117 Female, age 91, right hemisphere 20.2
1938 Female, age 85, left hemisphere 19.9
2764 Male, age 80, right hemisphere 19.8
1787 Male, age 76, left hemisphere 19.2
Hippocampus, CA1
nTPM: 21.9
2749 Male, age 80, left hemisphere 29.3
2045 Male, age 76, both hemispheres 23.5
1873 Female, age 85, both hemispheres 20.3
2527 Male, age 74, both hemispheres 18.7
2082 Female, age 91, right hemisphere 17.9
Hippocampus, CA2
nTPM: 20.3
1892 Male, age 76, both hemispheres 22.3
2437 Female, age 94, left hemisphere 21.7
1963 Male, age 80, left hemisphere 21.4
1940 Female, age 85, left hemisphere 20.1
2249 Male, age 74, both hemispheres 18.6
2113 Female, age 91, right hemisphere 17.8
Hippocampus, CA3
nTPM: 22.7
2137 Male, age 80, left hemisphere 26.9
1867 Male, age 76, both hemispheres 23.8
2861 Female, age 67, both hemispheres 23.0
2620 Female, age 94, left hemisphere 22.8
2436 Male, age 74, both hemispheres 20.3
1891 Female, age 85, both hemispheres 19.4
Parahippocampal cortex
nTPM: 20.7
2245 Female, age 91, both hemispheres 22.4
2622 Female, age 67, right hemisphere 21.7
2018 Male, age 76, both hemispheres 21.6
1850 Male, age 80, both hemispheres 21.3
2692 Male, age 74, both hemispheres 21.0
2693 Female, age 94, both hemispheres 20.4
2250 Female, age 67, right hemisphere 20.2
1933 Female, age 85, both hemispheres 20.0
2532 Female, age 72, left hemisphere 19.5
1990 Female, age 91, right hemisphere 18.6
Perirhinal gyrus
nTPM: 21.3
1847 Female, age 91, left hemisphere 22.2
1794 Male, age 80, right hemisphere 21.7
2521 Female, age 94, right hemisphere 21.5
1841 Female, age 85, right hemisphere 21.3
2848 Male, age 76, right hemisphere 19.8
Subiculum
nTPM: 20.6
2438 Female, age 94, left hemisphere 24.1
1901 Male, age 80, both hemispheres 22.3
2042 Male, age 76, both hemispheres 21.1
2619 Male, age 74, both hemispheres 20.7
2729 Female, age 91, right hemisphere 18.2
1977 Female, age 85, both hemispheres 17.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 32.8
Min nTPM: 10.1
Std nTPM: 4.5
Median nTPM: 17.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 32.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 31.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 29.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 29.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 29.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 29.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 28.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 28.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 27.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 27.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.2
FF:10153-102I9 76 years, female 12.3
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.8
Samples: 4

Max nTPM: 97.2
Min nTPM: 52.2
Sample A Female 97.2
Sample B Female 64.6
Sample C Male 77.3
Sample D Male 52.2
Entorhinal cortex
nTPM: 58.3
Samples: 4

Max nTPM: 62.3
Min nTPM: 47.8
Sample A Female 61.5
Sample B Female 62.3
Sample C Male 61.6
Sample D Male 47.8
Subiculum
nTPM: 60.2
Samples: 4

Max nTPM: 78.4
Min nTPM: 50.3
Sample A Female 78.4
Sample B Female 54.0
Sample C Male 50.3
Sample D Male 58.0
Ventral hippocampus
nTPM: 62.3
Samples: 4

Max nTPM: 68.7
Min nTPM: 46.0
Sample A Female 67.5
Sample B Female 46.0
Sample C Male 68.7
Sample D Male 67.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.9
Samples: 4

Max nTPM: 42.7
Min nTPM: 39.6
Sample A Male 39.6
Sample B Male 40.2
Sample C Female 41.2
Sample D Female 42.7
Hippocampal formation
nTPM: 41.5
Samples: 4

Max nTPM: 43.8
Min nTPM: 37.7
Sample A Male 41.4
Sample B Male 43.8
Sample C Female 42.9
Sample D Female 37.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68632996 Antisense, RP_050125_02_C02, Mouse strain C57BL/6J (56 days, male) 1.4

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