HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.9 nTPM
HPA:20.9 nTPM
GTEx:24.6 nTPM
FANTOM5:11.5 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:12.7 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067114
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.9
Sample id Sample description nTPM
Hippocampus
nTPM: 20.4
2529 Female, age 94, left hemisphere 21.7
1911 Female, age 85, right hemisphere 20.7
2148 Female, age 91, left hemisphere 20.5
1855 Male, age 76, left hemisphere 20.0
1898 Male, age 80, left hemisphere 20.0
2621 Female, age 67, right hemisphere 19.4
Dentate gyrus
nTPM: 20.9
2531 Female, age 67, both hemispheres 21.8
2528 Male, age 74, both hemispheres 21.6
2530 Female, age 94, left hemisphere 21.1
2010 Male, age 76, both hemispheres 20.9
1927 Female, age 91, both hemispheres 20.3
2246 Female, age 85, both hemispheres 19.7
Entorhinal gyrus
nTPM: 20.8
2764 Male, age 80, right hemisphere 21.6
2686 Male, age 75, right hemisphere 21.2
2613 Female, age 94, left hemisphere 21.1
1787 Male, age 76, left hemisphere 20.6
2117 Female, age 91, right hemisphere 20.2
1938 Female, age 85, left hemisphere 20.1
Hippocampus, CA1
nTPM: 20.2
1873 Female, age 85, both hemispheres 21.0
2749 Male, age 80, left hemisphere 20.3
2527 Male, age 74, both hemispheres 20.2
2045 Male, age 76, both hemispheres 19.7
2082 Female, age 91, right hemisphere 19.7
Hippocampus, CA2
nTPM: 20.4
2437 Female, age 94, left hemisphere 21.3
1963 Male, age 80, left hemisphere 21.2
2113 Female, age 91, right hemisphere 20.5
2249 Male, age 74, both hemispheres 20.1
1892 Male, age 76, both hemispheres 19.7
1940 Female, age 85, left hemisphere 19.5
Hippocampus, CA3
nTPM: 20.8
2620 Female, age 94, left hemisphere 22.9
2861 Female, age 67, both hemispheres 22.1
1891 Female, age 85, both hemispheres 20.3
1867 Male, age 76, both hemispheres 20.2
2137 Male, age 80, left hemisphere 20.1
2436 Male, age 74, both hemispheres 19.3
Parahippocampal cortex
nTPM: 20.1
2622 Female, age 67, right hemisphere 21.4
2018 Male, age 76, both hemispheres 21.1
1990 Female, age 91, right hemisphere 20.7
2532 Female, age 72, left hemisphere 20.1
2692 Male, age 74, both hemispheres 19.9
2693 Female, age 94, both hemispheres 19.9
1850 Male, age 80, both hemispheres 19.8
1933 Female, age 85, both hemispheres 19.8
2245 Female, age 91, both hemispheres 19.2
2250 Female, age 67, right hemisphere 19.2
Perirhinal gyrus
nTPM: 19.9
1794 Male, age 80, right hemisphere 21.2
1841 Female, age 85, right hemisphere 20.0
2521 Female, age 94, right hemisphere 19.6
2848 Male, age 76, right hemisphere 19.4
1847 Female, age 91, left hemisphere 19.3
Subiculum
nTPM: 20.8
2619 Male, age 74, both hemispheres 21.5
1977 Female, age 85, both hemispheres 20.9
1901 Male, age 80, both hemispheres 20.7
2042 Male, age 76, both hemispheres 20.7
2729 Female, age 91, right hemisphere 20.7
2438 Female, age 94, left hemisphere 20.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.6
Samples: 197

Max nTPM: 47.9
Min nTPM: 11.0
Std nTPM: 6.9
Median nTPM: 23.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 44.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 44.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 42.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 41.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 41.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 40.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 39.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 37.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 35.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.5
FF:10169-103B7 60 years, female 13.6
FF:10153-102I9 76 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.1
Sample A Female 5.6
Sample B Female 4.6
Sample C Male 4.7
Sample D Male 3.1
Entorhinal cortex
nTPM: 3.1
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.5
Sample A Female 2.7
Sample B Female 3.6
Sample C Male 3.4
Sample D Male 2.5
Subiculum
nTPM: 3.6
Samples: 4

Max nTPM: 4.3
Min nTPM: 3.1
Sample A Female 4.3
Sample B Female 3.4
Sample C Male 3.5
Sample D Male 3.1
Ventral hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.7
Sample A Female 4.5
Sample B Female 3.7
Sample C Male 4.5
Sample D Male 4.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.5
Sample A Male 13.0
Sample B Male 12.1
Sample C Female 11.9
Sample D Female 9.5
Hippocampal formation
nTPM: 12.7
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.0
Sample A Male 12.7
Sample B Male 11.0
Sample C Female 12.1
Sample D Female 14.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69853996 Antisense, RP_050324_03_B04, Mouse strain C57BL/6J (56 days, male) 3.9

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