COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.1 nTPM
HPA:5.6 nTPM
GTEx:20.1 nTPM
FANTOM5:14.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA067114
Endothelial cells High
Glandular cells High



COLON - HPA RNA-seqi
Average nTPM 5.6
overview
Male, age 54 		Colon sample 67
nTPM: 7.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 4.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 5.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 4.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 2.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 5.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 5.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 5.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 20.1
Samples: 373

Max nTPM: 47.6
Min nTPM: 8.0
Std nTPM: 6.2
Median nTPM: 19.2
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 47.6
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 43.1
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 41.3
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 39.7
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 38.5
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 35.9
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 35.1
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 34.8
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 34.6
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 34.1
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 33.9
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Colon - Transverse
Average nTPM: 16.4
Samples: 406

Max nTPM: 38.4
Min nTPM: 4.5
Std nTPM: 4.6
Median nTPM: 15.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 38.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 37.0
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 31.1
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 29.8
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 28.8
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 28.7
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 28.6
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 28.5
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 28.2
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 28.0
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 26.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 14.7
FF:10014-101C5 62,83,84 years, mixed 14.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.