HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.5 nTPM
HPA:42.5 nTPM
GTEx:23.6 nTPM
FANTOM5:263.2 Scaled Tags Per Million
Pig:133.7 nTPM
Mouse:120.5 nTPM
Allen mouse:15.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035813Antibody CAB016395
Glial cells MediumLow
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.5
Sample id Sample description nTPM
Hippocampus
nTPM: 31.5
2148 Female, age 91, left hemisphere 46.1
2621 Female, age 67, right hemisphere 33.8
1898 Male, age 80, left hemisphere 32.3
1911 Female, age 85, right hemisphere 31.3
1855 Male, age 76, left hemisphere 31.1
2529 Female, age 94, left hemisphere 14.7
Dentate gyrus
nTPM: 35.3
1927 Female, age 91, both hemispheres 64.7
2531 Female, age 67, both hemispheres 41.0
2246 Female, age 85, both hemispheres 36.6
2010 Male, age 76, both hemispheres 26.8
2528 Male, age 74, both hemispheres 22.2
2530 Female, age 94, left hemisphere 20.5
Entorhinal gyrus
nTPM: 33.6
2613 Female, age 94, left hemisphere 47.2
1938 Female, age 85, left hemisphere 46.5
2764 Male, age 80, right hemisphere 40.8
1787 Male, age 76, left hemisphere 28.2
2686 Male, age 75, right hemisphere 21.5
2117 Female, age 91, right hemisphere 17.5
Hippocampus, CA1
nTPM: 41.7
2749 Male, age 80, left hemisphere 84.9
1873 Female, age 85, both hemispheres 45.6
2082 Female, age 91, right hemisphere 29.2
2045 Male, age 76, both hemispheres 27.6
2527 Male, age 74, both hemispheres 21.5
Hippocampus, CA2
nTPM: 28.4
1892 Male, age 76, both hemispheres 40.7
1963 Male, age 80, left hemisphere 39.9
2113 Female, age 91, right hemisphere 28.1
1940 Female, age 85, left hemisphere 25.6
2437 Female, age 94, left hemisphere 19.6
2249 Male, age 74, both hemispheres 16.8
Hippocampus, CA3
nTPM: 36.9
2137 Male, age 80, left hemisphere 79.6
2620 Female, age 94, left hemisphere 42.0
2861 Female, age 67, both hemispheres 38.6
1867 Male, age 76, both hemispheres 27.0
1891 Female, age 85, both hemispheres 22.6
2436 Male, age 74, both hemispheres 11.9
Parahippocampal cortex
nTPM: 33.5
2245 Female, age 91, both hemispheres 48.3
1933 Female, age 85, both hemispheres 43.4
1850 Male, age 80, both hemispheres 37.2
2693 Female, age 94, both hemispheres 36.0
2622 Female, age 67, right hemisphere 35.9
1990 Female, age 91, right hemisphere 35.8
2250 Female, age 67, right hemisphere 35.4
2532 Female, age 72, left hemisphere 31.9
2018 Male, age 76, both hemispheres 20.2
2692 Male, age 74, both hemispheres 11.5
Perirhinal gyrus
nTPM: 42.5
1847 Female, age 91, left hemisphere 59.1
1841 Female, age 85, right hemisphere 43.5
2521 Female, age 94, right hemisphere 43.5
1794 Male, age 80, right hemisphere 39.6
2848 Male, age 76, right hemisphere 26.8
Subiculum
nTPM: 21.9
1977 Female, age 85, both hemispheres 36.2
1901 Male, age 80, both hemispheres 28.5
2729 Female, age 91, right hemisphere 28.1
2438 Female, age 94, left hemisphere 14.6
2619 Male, age 74, both hemispheres 14.0
2042 Male, age 76, both hemispheres 9.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.6
Samples: 197

Max nTPM: 58.8
Min nTPM: 4.2
Std nTPM: 10.7
Median nTPM: 21.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 58.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 56.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 47.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 45.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 44.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 43.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 42.6
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 42.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 42.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 42.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 42.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 263.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 263.2
FF:10169-103B7 60 years, female 271.0
FF:10153-102I9 76 years, female 255.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 133.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 115.1
Samples: 4

Max nTPM: 127.7
Min nTPM: 95.5
Sample A Female 118.0
Sample B Female 127.7
Sample C Male 95.5
Sample D Male 119.0
Entorhinal cortex
nTPM: 133.8
Samples: 4

Max nTPM: 145.5
Min nTPM: 128.6
Sample A Female 132.0
Sample B Female 128.6
Sample C Male 128.9
Sample D Male 145.5
Subiculum
nTPM: 125.6
Samples: 4

Max nTPM: 161.5
Min nTPM: 102.9
Sample A Female 161.5
Sample B Female 116.7
Sample C Male 121.2
Sample D Male 102.9
Ventral hippocampus
nTPM: 114.9
Samples: 4

Max nTPM: 129.9
Min nTPM: 103.8
Sample A Female 106.5
Sample B Female 103.8
Sample C Male 119.3
Sample D Male 129.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 120.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.5
Samples: 4

Max nTPM: 150.7
Min nTPM: 105.1
Sample A Male 109.2
Sample B Male 105.1
Sample C Female 116.9
Sample D Female 150.7
Hippocampal formation
nTPM: 120.3
Samples: 4

Max nTPM: 135.5
Min nTPM: 103.9
Sample A Male 109.9
Sample B Male 135.5
Sample C Female 132.0
Sample D Female 103.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
70429202 Antisense, RP_050614_01_C02, Mouse strain C57BL/6J (56 days, male) 18.7
71574485 Antisense, RP_050915_03_G09, Mouse strain C57BL/6J (56 days, male) 12.5

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The Human Protein Atlas

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