HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.7 nTPM
HPA:11.7 nTPM
GTEx:16.3 nTPM
FANTOM5:21.0 Scaled Tags Per Million
Pig:5.6 nTPM
Mouse:7.3 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023871Antibody HPA052645
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.7
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
2529 Female, age 94, left hemisphere 12.2
1855 Male, age 76, left hemisphere 11.7
2148 Female, age 91, left hemisphere 11.4
1911 Female, age 85, right hemisphere 11.3
1898 Male, age 80, left hemisphere 11.0
2621 Female, age 67, right hemisphere 10.9
Dentate gyrus
nTPM: 11.3
2010 Male, age 76, both hemispheres 12.2
2530 Female, age 94, left hemisphere 12.1
1927 Female, age 91, both hemispheres 11.1
2528 Male, age 74, both hemispheres 11.0
2531 Female, age 67, both hemispheres 10.8
2246 Female, age 85, both hemispheres 10.7
Entorhinal gyrus
nTPM: 10.8
2117 Female, age 91, right hemisphere 12.4
2686 Male, age 75, right hemisphere 11.1
1787 Male, age 76, left hemisphere 10.5
1938 Female, age 85, left hemisphere 10.5
2764 Male, age 80, right hemisphere 10.3
2613 Female, age 94, left hemisphere 10.2
Hippocampus, CA1
nTPM: 11.5
2045 Male, age 76, both hemispheres 12.2
2527 Male, age 74, both hemispheres 11.9
1873 Female, age 85, both hemispheres 11.8
2082 Female, age 91, right hemisphere 11.5
2749 Male, age 80, left hemisphere 9.9
Hippocampus, CA2
nTPM: 11.5
2437 Female, age 94, left hemisphere 12.4
2113 Female, age 91, right hemisphere 11.9
1892 Male, age 76, both hemispheres 11.7
2249 Male, age 74, both hemispheres 11.3
1963 Male, age 80, left hemisphere 11.2
1940 Female, age 85, left hemisphere 10.5
Hippocampus, CA3
nTPM: 10.6
1867 Male, age 76, both hemispheres 11.3
1891 Female, age 85, both hemispheres 11.2
2861 Female, age 67, both hemispheres 11.1
2436 Male, age 74, both hemispheres 10.3
2137 Male, age 80, left hemisphere 10.2
2620 Female, age 94, left hemisphere 9.7
Parahippocampal cortex
nTPM: 10.9
2018 Male, age 76, both hemispheres 11.7
2692 Male, age 74, both hemispheres 11.5
2693 Female, age 94, both hemispheres 11.2
1933 Female, age 85, both hemispheres 11.1
1990 Female, age 91, right hemisphere 10.9
2532 Female, age 72, left hemisphere 10.9
1850 Male, age 80, both hemispheres 10.8
2250 Female, age 67, right hemisphere 10.7
2245 Female, age 91, both hemispheres 10.5
2622 Female, age 67, right hemisphere 10.1
Perirhinal gyrus
nTPM: 10.4
2521 Female, age 94, right hemisphere 11.1
2848 Male, age 76, right hemisphere 10.5
1847 Female, age 91, left hemisphere 10.4
1794 Male, age 80, right hemisphere 10.1
1841 Female, age 85, right hemisphere 10.1
Subiculum
nTPM: 11.7
2042 Male, age 76, both hemispheres 12.9
2619 Male, age 74, both hemispheres 12.1
2729 Female, age 91, right hemisphere 12.1
1901 Male, age 80, both hemispheres 11.7
2438 Female, age 94, left hemisphere 11.2
1977 Female, age 85, both hemispheres 10.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 34.4
Min nTPM: 4.7
Std nTPM: 5.9
Median nTPM: 15.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 34.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 33.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 30.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 29.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 28.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 28.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 27.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.0
FF:10153-102I9 76 years, female 21.2
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.8
Samples: 4

Max nTPM: 6.1
Min nTPM: 3.8
Sample A Female 5.1
Sample B Female 4.1
Sample C Male 6.1
Sample D Male 3.8
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.0
Sample A Female 5.4
Sample B Female 5.8
Sample C Male 6.3
Sample D Male 5.0
Subiculum
nTPM: 5.6
Samples: 4

Max nTPM: 6.1
Min nTPM: 5.2
Sample A Female 6.1
Sample B Female 5.5
Sample C Male 5.2
Sample D Male 5.4
Ventral hippocampus
nTPM: 5.3
Samples: 4

Max nTPM: 6.6
Min nTPM: 4.6
Sample A Female 5.3
Sample B Female 4.6
Sample C Male 6.6
Sample D Male 4.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.0
Sample A Male 7.9
Sample B Male 6.9
Sample C Female 7.7
Sample D Female 6.0
Hippocampal formation
nTPM: 7.3
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.6
Sample A Male 6.8
Sample B Male 6.6
Sample C Female 7.3
Sample D Female 8.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
68443507 Antisense, RP_050111_02_B04, Mouse strain C57BL/6J (56 days, male) 6.0

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