HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:20.6 nTPM
FANTOM5:71.7 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:47.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 17.2
1898 Male, age 80, left hemisphere 19.9
2621 Female, age 67, right hemisphere 17.4
1855 Male, age 76, left hemisphere 16.9
2148 Female, age 91, left hemisphere 16.9
2529 Female, age 94, left hemisphere 16.4
1911 Female, age 85, right hemisphere 15.9
Dentate gyrus
nTPM: 17.2
1927 Female, age 91, both hemispheres 18.1
2530 Female, age 94, left hemisphere 17.6
2246 Female, age 85, both hemispheres 17.2
2010 Male, age 76, both hemispheres 17.1
2528 Male, age 74, both hemispheres 16.9
2531 Female, age 67, both hemispheres 16.6
Entorhinal gyrus
nTPM: 17.6
1938 Female, age 85, left hemisphere 19.0
2764 Male, age 80, right hemisphere 18.7
1787 Male, age 76, left hemisphere 18.5
2117 Female, age 91, right hemisphere 17.1
2613 Female, age 94, left hemisphere 16.1
2686 Male, age 75, right hemisphere 15.9
Hippocampus, CA1
nTPM: 18.2
2749 Male, age 80, left hemisphere 23.1
1873 Female, age 85, both hemispheres 17.6
2045 Male, age 76, both hemispheres 17.5
2082 Female, age 91, right hemisphere 16.9
2527 Male, age 74, both hemispheres 15.7
Hippocampus, CA2
nTPM: 17.6
1892 Male, age 76, both hemispheres 19.3
1963 Male, age 80, left hemisphere 18.9
1940 Female, age 85, left hemisphere 17.4
2437 Female, age 94, left hemisphere 17.2
2249 Male, age 74, both hemispheres 16.5
2113 Female, age 91, right hemisphere 16.3
Hippocampus, CA3
nTPM: 17.2
2137 Male, age 80, left hemisphere 21.3
1867 Male, age 76, both hemispheres 18.1
1891 Female, age 85, both hemispheres 16.8
2436 Male, age 74, both hemispheres 16.8
2620 Female, age 94, left hemisphere 15.7
2861 Female, age 67, both hemispheres 14.7
Parahippocampal cortex
nTPM: 17.3
1850 Male, age 80, both hemispheres 20.2
1990 Female, age 91, right hemisphere 18.5
2532 Female, age 72, left hemisphere 18.3
1933 Female, age 85, both hemispheres 17.6
2245 Female, age 91, both hemispheres 17.4
2250 Female, age 67, right hemisphere 16.8
2693 Female, age 94, both hemispheres 16.8
2622 Female, age 67, right hemisphere 16.6
2018 Male, age 76, both hemispheres 15.8
2692 Male, age 74, both hemispheres 15.3
Perirhinal gyrus
nTPM: 20.0
1794 Male, age 80, right hemisphere 22.9
1847 Female, age 91, left hemisphere 21.7
2848 Male, age 76, right hemisphere 19.8
1841 Female, age 85, right hemisphere 18.8
2521 Female, age 94, right hemisphere 17.0
Subiculum
nTPM: 16.7
1901 Male, age 80, both hemispheres 17.8
1977 Female, age 85, both hemispheres 17.4
2729 Female, age 91, right hemisphere 16.7
2042 Male, age 76, both hemispheres 16.4
2619 Male, age 74, both hemispheres 16.1
2438 Female, age 94, left hemisphere 15.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 41.9
Min nTPM: 5.0
Std nTPM: 7.3
Median nTPM: 19.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 41.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 39.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 37.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 37.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 36.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 36.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 35.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 35.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 35.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 33.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.7
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 55.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 19.8
Min nTPM: 15.0
Sample A Female 19.8
Sample B Female 16.9
Sample C Male 17.3
Sample D Male 15.0
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 19.2
Min nTPM: 16.0
Sample A Female 19.2
Sample B Female 16.0
Sample C Male 17.3
Sample D Male 16.8
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.3
Sample A Female 19.2
Sample B Female 14.8
Sample C Male 16.6
Sample D Male 14.3
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 18.3
Min nTPM: 13.7
Sample A Female 16.5
Sample B Female 13.7
Sample C Male 18.3
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.1
Samples: 4

Max nTPM: 52.7
Min nTPM: 44.9
Sample A Male 44.9
Sample B Male 45.6
Sample C Female 45.3
Sample D Female 52.7
Hippocampal formation
nTPM: 46.0
Samples: 4

Max nTPM: 49.1
Min nTPM: 43.4
Sample A Male 46.9
Sample B Male 43.4
Sample C Female 44.5
Sample D Female 49.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
1636 Antisense, RP_040507_02_D04, Mouse strain C57BL/6J (56 days, male) 0.3
1635 Antisense, RP_040507_02_D04, Mouse strain C57BL/6J (56 days, male) 0.1

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