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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:67.0 nTPM
GTEx:67.0 nTPM
FANTOM5:27.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA056127
Squamous epithelial cells Low



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 67.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 67.0
Samples: 156

Max nTPM: 497.5
Min nTPM: 5.1
Std nTPM: 65.3
Median nTPM: 48.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 497.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 315.6
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 234.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 226.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 207.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 174.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 174.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 170.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 165.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 164.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 162.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 152.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 152.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 147.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 144.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 143.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 141.9
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 139.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 138.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 134.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 127.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 125.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 120.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 118.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 116.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 113.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 112.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 112.2
GTEX-11I78-2026-SM-5987C 50-59 years, female 111.1
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 110.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 109.9
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 107.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 107.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 105.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 104.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 102.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 101.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 99.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 97.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 97.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 97.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 94.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 94.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 93.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 93.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 89.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 86.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 86.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 85.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 84.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 84.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 84.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 82.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 82.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 82.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 81.6
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 81.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 80.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 80.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 79.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 79.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 78.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 78.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 73.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 69.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 66.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 66.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 63.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 63.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 63.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 62.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 62.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 62.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 61.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 59.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 55.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 54.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 49.4
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 47.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 46.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 45.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 44.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 42.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 42.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 42.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 41.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 41.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 41.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 37.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 36.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 36.5
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 36.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 35.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 34.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 31.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 30.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 30.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 29.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 28.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 28.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 27.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 26.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 26.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 24.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 24.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 23.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 22.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 20.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 18.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 18.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 18.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 17.9
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 17.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 17.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 16.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 16.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 16.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 15.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 15.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 14.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 14.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 13.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 13.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 12.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 12.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 12.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 11.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 11.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 11.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 10.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 10.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 10.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 10.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 10.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 9.9
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 9.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 9.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 9.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 9.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 8.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 8.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 8.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 8.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 8.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 8.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 8.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 7.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 7.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 7.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 7.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 7.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 6.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 6.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 6.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 5.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 5.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 27.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 27.8
FF:10204-103F6 68 years, female 27.8

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