HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		39.239
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.4 nTPM
HPA:21.4 nTPM
GTEx:16.8 nTPM
FANTOM5:26.8 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:7.4 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012082
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA012395
Hippocampal formation mean intensity 39.239
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 32.448
Molecular layer of the dentate gyrus 28.258
Granular dentate gyrus 38.967
CA1 - oriens layer 24.054
CA1 - pyramidal layer 38.188
CA1 - radiatum layer 29.903
CA2 - oriens layer 23.293
CA2 - pyramidal layer 37.381
CA2 - radiatum layer 22.793
CA3 - oriens layer 24.492
CA3 - pyramidal layer 39.239
CA3 - radiatum layer 26.194
Stratum lucidum 28.584
Lacunosum moleculare 25.936
Subiculum 8.592

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.4
Sample id Sample description nTPM
Hippocampus
nTPM: 19.1
1855 Male, age 76, left hemisphere 23.2
2148 Female, age 91, left hemisphere 20.8
1911 Female, age 85, right hemisphere 19.4
2529 Female, age 94, left hemisphere 18.2
2621 Female, age 67, right hemisphere 17.2
1898 Male, age 80, left hemisphere 15.7
Dentate gyrus
nTPM: 21.0
2010 Male, age 76, both hemispheres 30.2
2531 Female, age 67, both hemispheres 21.2
1927 Female, age 91, both hemispheres 21.1
2528 Male, age 74, both hemispheres 19.5
2246 Female, age 85, both hemispheres 19.3
2530 Female, age 94, left hemisphere 14.8
Entorhinal gyrus
nTPM: 19.3
1787 Male, age 76, left hemisphere 22.3
2686 Male, age 75, right hemisphere 20.9
2764 Male, age 80, right hemisphere 20.4
2117 Female, age 91, right hemisphere 18.4
2613 Female, age 94, left hemisphere 17.9
1938 Female, age 85, left hemisphere 16.0
Hippocampus, CA1
nTPM: 21.4
2045 Male, age 76, both hemispheres 33.6
2082 Female, age 91, right hemisphere 20.6
1873 Female, age 85, both hemispheres 18.6
2527 Male, age 74, both hemispheres 17.6
2749 Male, age 80, left hemisphere 16.7
Hippocampus, CA2
nTPM: 18.8
2113 Female, age 91, right hemisphere 20.9
1940 Female, age 85, left hemisphere 20.1
1892 Male, age 76, both hemispheres 18.6
1963 Male, age 80, left hemisphere 18.1
2437 Female, age 94, left hemisphere 17.8
2249 Male, age 74, both hemispheres 17.4
Hippocampus, CA3
nTPM: 20.4
2620 Female, age 94, left hemisphere 24.2
1867 Male, age 76, both hemispheres 21.0
1891 Female, age 85, both hemispheres 19.5
2137 Male, age 80, left hemisphere 19.5
2861 Female, age 67, both hemispheres 19.4
2436 Male, age 74, both hemispheres 18.6
Parahippocampal cortex
nTPM: 19.6
2018 Male, age 76, both hemispheres 28.7
1990 Female, age 91, right hemisphere 21.2
2692 Male, age 74, both hemispheres 19.8
2532 Female, age 72, left hemisphere 18.9
2622 Female, age 67, right hemisphere 18.7
2693 Female, age 94, both hemispheres 18.7
1850 Male, age 80, both hemispheres 18.1
2245 Female, age 91, both hemispheres 17.4
2250 Female, age 67, right hemisphere 17.2
1933 Female, age 85, both hemispheres 17.1
Perirhinal gyrus
nTPM: 18.5
2848 Male, age 76, right hemisphere 21.0
1841 Female, age 85, right hemisphere 18.7
2521 Female, age 94, right hemisphere 18.1
1794 Male, age 80, right hemisphere 17.7
1847 Female, age 91, left hemisphere 16.9
Subiculum
nTPM: 19.8
2042 Male, age 76, both hemispheres 25.8
1901 Male, age 80, both hemispheres 20.0
1977 Female, age 85, both hemispheres 19.1
2729 Female, age 91, right hemisphere 18.4
2619 Male, age 74, both hemispheres 18.3
2438 Female, age 94, left hemisphere 17.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 38.5
Min nTPM: 5.1
Std nTPM: 4.6
Median nTPM: 15.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 38.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 34.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 30.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 30.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 29.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 27.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 26.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 26.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 25.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.8
FF:10169-103B7 60 years, female 31.3
FF:10153-102I9 76 years, female 22.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 14.4
Min nTPM: 11.7
Sample A Female 12.0
Sample B Female 11.7
Sample C Male 11.8
Sample D Male 14.4
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.2
Sample A Female 12.5
Sample B Female 10.2
Sample C Male 12.0
Sample D Male 13.7
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.6
Sample A Female 12.9
Sample B Female 11.1
Sample C Male 12.5
Sample D Male 10.6
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.7
Sample A Female 10.7
Sample B Female 11.1
Sample C Male 15.2
Sample D Male 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.6
Sample A Male 7.9
Sample B Male 7.4
Sample C Female 6.6
Sample D Female 7.7
Hippocampal formation
nTPM: 7.0
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.1
Sample A Male 6.1
Sample B Male 8.0
Sample C Female 6.9
Sample D Female 7.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
70194648 Antisense, RP_050517_01_G10, Mouse strain C57BL/6J (56 days, male) 5.3

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