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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:204.8 nTPM
GTEx:204.8 nTPM
FANTOM5:413.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA034838
Squamous epithelial cells Medium

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 204.8
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 204.8
Samples: 156

Max nTPM: 415.0
Min nTPM: 98.0
Std nTPM: 62.0
Median nTPM: 200.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 415.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 413.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 391.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 363.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 356.2
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 311.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 309.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 309.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 308.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 304.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 304.0
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 303.6
GTEX-11I78-2026-SM-5987C 50-59 years, female 291.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 290.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 285.3
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 279.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 278.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 278.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 278.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 276.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 275.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 274.1
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 271.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 270.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 266.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 264.7
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 262.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 260.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 258.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 258.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 256.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 255.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 252.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 252.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 250.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 249.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 246.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 246.3
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 244.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 243.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 242.8
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 240.8
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 239.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 233.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 232.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 231.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 229.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 228.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 226.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 226.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 225.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 225.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 224.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 224.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 223.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 221.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 221.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 221.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 219.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 218.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 218.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 217.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 216.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 215.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 215.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 214.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 212.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 210.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 210.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 205.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 205.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 205.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 204.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 204.0
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 203.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 202.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 201.7
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 201.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 199.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 199.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 199.0
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 198.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 197.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 190.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 189.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 188.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 184.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 184.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 182.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 182.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 181.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 180.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 177.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 175.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 175.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 174.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 174.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 171.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 169.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 169.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 168.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 167.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 167.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 167.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 166.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 166.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 165.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 165.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 164.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 164.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 163.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 163.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 162.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 162.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 160.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 159.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 157.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 157.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 156.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 154.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 154.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 153.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 153.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 152.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 151.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 150.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 148.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 143.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 142.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 142.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 141.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 140.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 140.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 140.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 139.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 138.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 136.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 135.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 135.0
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 134.8
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 133.9
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 130.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 130.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 130.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 129.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 127.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 126.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 126.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 123.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 121.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 120.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 114.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 113.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 104.2
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 100.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 98.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 413.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 413.1
FF:10204-103F6 68 years, female 413.1

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