HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.4 nTPM
HPA:11.4 nTPM
GTEx:12.4 nTPM
FANTOM5:23.6 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:15.6 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044566
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.1
1898 Male, age 80, left hemisphere 12.3
1855 Male, age 76, left hemisphere 12.1
1911 Female, age 85, right hemisphere 10.8
2621 Female, age 67, right hemisphere 10.8
2529 Female, age 94, left hemisphere 10.4
2148 Female, age 91, left hemisphere 10.0
Dentate gyrus
nTPM: 10.8
2530 Female, age 94, left hemisphere 11.4
2010 Male, age 76, both hemispheres 11.3
2528 Male, age 74, both hemispheres 10.8
2246 Female, age 85, both hemispheres 10.7
1927 Female, age 91, both hemispheres 10.6
2531 Female, age 67, both hemispheres 10.0
Entorhinal gyrus
nTPM: 10.4
1938 Female, age 85, left hemisphere 11.2
1787 Male, age 76, left hemisphere 11.1
2764 Male, age 80, right hemisphere 10.4
2686 Male, age 75, right hemisphere 10.3
2613 Female, age 94, left hemisphere 10.1
2117 Female, age 91, right hemisphere 9.5
Hippocampus, CA1
nTPM: 10.7
2749 Male, age 80, left hemisphere 12.4
1873 Female, age 85, both hemispheres 11.3
2527 Male, age 74, both hemispheres 10.2
2045 Male, age 76, both hemispheres 9.9
2082 Female, age 91, right hemisphere 9.5
Hippocampus, CA2
nTPM: 11.4
1892 Male, age 76, both hemispheres 13.3
1963 Male, age 80, left hemisphere 12.5
2249 Male, age 74, both hemispheres 11.4
2437 Female, age 94, left hemisphere 11.4
1940 Female, age 85, left hemisphere 10.8
2113 Female, age 91, right hemisphere 9.1
Hippocampus, CA3
nTPM: 10.5
1867 Male, age 76, both hemispheres 12.1
2436 Male, age 74, both hemispheres 11.0
1891 Female, age 85, both hemispheres 10.7
2137 Male, age 80, left hemisphere 10.7
2861 Female, age 67, both hemispheres 9.8
2620 Female, age 94, left hemisphere 8.5
Parahippocampal cortex
nTPM: 10.3
1850 Male, age 80, both hemispheres 11.3
2532 Female, age 72, left hemisphere 10.8
1933 Female, age 85, both hemispheres 10.6
2018 Male, age 76, both hemispheres 10.5
1990 Female, age 91, right hemisphere 10.2
2693 Female, age 94, both hemispheres 10.1
2692 Male, age 74, both hemispheres 10.0
2250 Female, age 67, right hemisphere 9.9
2245 Female, age 91, both hemispheres 9.8
2622 Female, age 67, right hemisphere 9.4
Perirhinal gyrus
nTPM: 10.4
1794 Male, age 80, right hemisphere 10.8
2848 Male, age 76, right hemisphere 10.8
1841 Female, age 85, right hemisphere 10.5
2521 Female, age 94, right hemisphere 10.3
1847 Female, age 91, left hemisphere 9.8
Subiculum
nTPM: 11.4
2438 Female, age 94, left hemisphere 13.1
1901 Male, age 80, both hemispheres 11.8
2042 Male, age 76, both hemispheres 11.7
1977 Female, age 85, both hemispheres 11.1
2729 Female, age 91, right hemisphere 10.4
2619 Male, age 74, both hemispheres 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.4
Samples: 197

Max nTPM: 21.7
Min nTPM: 5.8
Std nTPM: 2.6
Median nTPM: 12.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 21.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 18.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 18.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 18.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 17.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 17.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 17.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 17.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 17.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.6
FF:10169-103B7 60 years, female 28.2
FF:10153-102I9 76 years, female 18.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 29.5
Min nTPM: 17.7
Sample A Female 29.5
Sample B Female 21.0
Sample C Male 21.8
Sample D Male 17.7
Entorhinal cortex
nTPM: 20.9
Samples: 4

Max nTPM: 23.4
Min nTPM: 17.2
Sample A Female 20.3
Sample B Female 23.4
Sample C Male 22.5
Sample D Male 17.2
Subiculum
nTPM: 23.0
Samples: 4

Max nTPM: 29.0
Min nTPM: 19.8
Sample A Female 29.0
Sample B Female 22.2
Sample C Male 19.8
Sample D Male 21.1
Ventral hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 24.1
Min nTPM: 19.1
Sample A Female 24.1
Sample B Female 19.1
Sample C Male 23.5
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.6
Sample A Male 14.6
Sample B Male 13.3
Sample C Female 14.6
Sample D Female 11.6
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 17.5
Min nTPM: 14.3
Sample A Male 14.3
Sample B Male 15.8
Sample C Female 17.5
Sample D Female 14.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68797637 Antisense, RP_050210_02_H02, Mouse strain C57BL/6J (56 days, male) 1.2

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