HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.4 nTPM
HPA:25.4 nTPM
GTEx:18.4 nTPM
FANTOM5:34.7 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:17.8 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049285
Glial cells Not detected
Neuronal cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.4
Sample id Sample description nTPM
Hippocampus
nTPM: 24.5
2621 Female, age 67, right hemisphere 25.6
2148 Female, age 91, left hemisphere 25.0
1898 Male, age 80, left hemisphere 24.8
1855 Male, age 76, left hemisphere 24.2
2529 Female, age 94, left hemisphere 24.2
1911 Female, age 85, right hemisphere 23.1
Dentate gyrus
nTPM: 24.3
2531 Female, age 67, both hemispheres 25.1
2010 Male, age 76, both hemispheres 24.8
2528 Male, age 74, both hemispheres 24.6
1927 Female, age 91, both hemispheres 24.2
2246 Female, age 85, both hemispheres 23.6
2530 Female, age 94, left hemisphere 23.6
Entorhinal gyrus
nTPM: 25.4
2686 Male, age 75, right hemisphere 27.3
1938 Female, age 85, left hemisphere 25.7
2613 Female, age 94, left hemisphere 25.7
2764 Male, age 80, right hemisphere 25.5
1787 Male, age 76, left hemisphere 24.5
2117 Female, age 91, right hemisphere 23.7
Hippocampus, CA1
nTPM: 24.7
2749 Male, age 80, left hemisphere 26.0
2045 Male, age 76, both hemispheres 25.4
1873 Female, age 85, both hemispheres 24.5
2082 Female, age 91, right hemisphere 24.1
2527 Male, age 74, both hemispheres 23.7
Hippocampus, CA2
nTPM: 24.4
1892 Male, age 76, both hemispheres 26.7
2113 Female, age 91, right hemisphere 25.2
1963 Male, age 80, left hemisphere 25.0
1940 Female, age 85, left hemisphere 23.8
2249 Male, age 74, both hemispheres 23.2
2437 Female, age 94, left hemisphere 22.5
Hippocampus, CA3
nTPM: 25.4
2620 Female, age 94, left hemisphere 28.5
2861 Female, age 67, both hemispheres 27.1
1867 Male, age 76, both hemispheres 25.7
2137 Male, age 80, left hemisphere 24.6
1891 Female, age 85, both hemispheres 23.3
2436 Male, age 74, both hemispheres 22.9
Parahippocampal cortex
nTPM: 24.3
2622 Female, age 67, right hemisphere 27.5
2692 Male, age 74, both hemispheres 25.1
1850 Male, age 80, both hemispheres 24.8
1933 Female, age 85, both hemispheres 24.8
2693 Female, age 94, both hemispheres 24.3
2245 Female, age 91, both hemispheres 24.0
2532 Female, age 72, left hemisphere 24.0
1990 Female, age 91, right hemisphere 23.7
2018 Male, age 76, both hemispheres 22.5
2250 Female, age 67, right hemisphere 22.0
Perirhinal gyrus
nTPM: 24.1
1794 Male, age 80, right hemisphere 24.8
1847 Female, age 91, left hemisphere 24.5
1841 Female, age 85, right hemisphere 24.4
2848 Male, age 76, right hemisphere 23.5
2521 Female, age 94, right hemisphere 23.3
Subiculum
nTPM: 25.0
2619 Male, age 74, both hemispheres 26.4
1901 Male, age 80, both hemispheres 25.3
2729 Female, age 91, right hemisphere 25.3
1977 Female, age 85, both hemispheres 24.6
2042 Male, age 76, both hemispheres 24.5
2438 Female, age 94, left hemisphere 24.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.4
Samples: 197

Max nTPM: 35.1
Min nTPM: 8.2
Std nTPM: 4.7
Median nTPM: 18.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 35.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 34.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 29.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 28.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 27.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 27.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 26.5
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 25.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 25.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.7
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 32.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 13.1
Min nTPM: 8.7
Sample A Female 11.8
Sample B Female 13.1
Sample C Male 8.7
Sample D Male 8.9
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 10.8
Min nTPM: 8.8
Sample A Female 10.5
Sample B Female 10.4
Sample C Male 10.8
Sample D Male 8.8
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.8
Sample A Female 11.9
Sample B Female 9.3
Sample C Male 8.7
Sample D Male 7.8
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.2
Sample A Female 9.6
Sample B Female 9.2
Sample C Male 12.4
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 19.1
Min nTPM: 17.0
Sample A Male 17.0
Sample B Male 17.1
Sample C Female 17.0
Sample D Female 19.1
Hippocampal formation
nTPM: 17.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 15.0
Sample A Male 15.0
Sample B Male 18.7
Sample C Female 21.1
Sample D Female 16.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
67815961 Antisense, RP_040920_02_D03, Mouse strain C57BL/6J (56 days, male) 4.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.