HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.7 nTPM
HPA:53.7 nTPM
GTEx:53.3 nTPM
FANTOM5:89.5 Scaled Tags Per Million
Pig:50.9 nTPM
Mouse:165.4 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007532
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.7
Sample id Sample description nTPM
Hippocampus
nTPM: 50.6
2148 Female, age 91, left hemisphere 56.3
2621 Female, age 67, right hemisphere 51.7
1911 Female, age 85, right hemisphere 51.5
2529 Female, age 94, left hemisphere 49.4
1855 Male, age 76, left hemisphere 47.5
1898 Male, age 80, left hemisphere 47.2
Dentate gyrus
nTPM: 53.7
2246 Female, age 85, both hemispheres 56.9
1927 Female, age 91, both hemispheres 55.7
2531 Female, age 67, both hemispheres 55.7
2528 Male, age 74, both hemispheres 52.2
2530 Female, age 94, left hemisphere 51.8
2010 Male, age 76, both hemispheres 50.2
Entorhinal gyrus
nTPM: 50.8
2764 Male, age 80, right hemisphere 52.5
1787 Male, age 76, left hemisphere 52.4
2686 Male, age 75, right hemisphere 51.3
1938 Female, age 85, left hemisphere 50.2
2117 Female, age 91, right hemisphere 49.7
2613 Female, age 94, left hemisphere 48.7
Hippocampus, CA1
nTPM: 53.1
2045 Male, age 76, both hemispheres 57.0
2082 Female, age 91, right hemisphere 54.4
1873 Female, age 85, both hemispheres 53.3
2749 Male, age 80, left hemisphere 51.2
2527 Male, age 74, both hemispheres 49.5
Hippocampus, CA2
nTPM: 51.0
1940 Female, age 85, left hemisphere 54.2
2113 Female, age 91, right hemisphere 53.2
2437 Female, age 94, left hemisphere 51.1
2249 Male, age 74, both hemispheres 50.3
1892 Male, age 76, both hemispheres 48.6
1963 Male, age 80, left hemisphere 48.6
Hippocampus, CA3
nTPM: 52.3
2620 Female, age 94, left hemisphere 58.7
1891 Female, age 85, both hemispheres 54.1
2137 Male, age 80, left hemisphere 51.9
2861 Female, age 67, both hemispheres 50.6
1867 Male, age 76, both hemispheres 50.2
2436 Male, age 74, both hemispheres 48.5
Parahippocampal cortex
nTPM: 51.2
2693 Female, age 94, both hemispheres 54.3
2245 Female, age 91, both hemispheres 52.3
2622 Female, age 67, right hemisphere 51.9
2250 Female, age 67, right hemisphere 51.7
1990 Female, age 91, right hemisphere 50.9
2018 Male, age 76, both hemispheres 50.6
2532 Female, age 72, left hemisphere 50.4
2692 Male, age 74, both hemispheres 50.3
1933 Female, age 85, both hemispheres 49.7
1850 Male, age 80, both hemispheres 49.6
Perirhinal gyrus
nTPM: 51.4
2521 Female, age 94, right hemisphere 56.1
1841 Female, age 85, right hemisphere 50.9
1794 Male, age 80, right hemisphere 50.8
2848 Male, age 76, right hemisphere 49.9
1847 Female, age 91, left hemisphere 49.2
Subiculum
nTPM: 51.1
2619 Male, age 74, both hemispheres 53.5
2729 Female, age 91, right hemisphere 53.5
1977 Female, age 85, both hemispheres 51.6
2042 Male, age 76, both hemispheres 50.3
2438 Female, age 94, left hemisphere 49.0
1901 Male, age 80, both hemispheres 48.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.3
Samples: 197

Max nTPM: 86.0
Min nTPM: 24.7
Std nTPM: 9.9
Median nTPM: 52.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 86.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 82.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 79.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 78.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 72.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 71.5
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 71.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 71.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 71.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 70.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 70.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.5
FF:10153-102I9 76 years, female 91.1
FF:10169-103B7 60 years, female 87.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.0
Samples: 4

Max nTPM: 57.5
Min nTPM: 45.2
Sample A Female 57.5
Sample B Female 52.1
Sample C Male 45.2
Sample D Male 49.0
Entorhinal cortex
nTPM: 42.8
Samples: 4

Max nTPM: 46.0
Min nTPM: 38.6
Sample A Female 41.2
Sample B Female 46.0
Sample C Male 45.2
Sample D Male 38.6
Subiculum
nTPM: 44.6
Samples: 4

Max nTPM: 59.3
Min nTPM: 39.0
Sample A Female 59.3
Sample B Female 39.0
Sample C Male 40.8
Sample D Male 39.2
Ventral hippocampus
nTPM: 48.0
Samples: 4

Max nTPM: 56.8
Min nTPM: 41.8
Sample A Female 46.8
Sample B Female 41.8
Sample C Male 56.8
Sample D Male 46.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 165.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.7
Samples: 4

Max nTPM: 118.5
Min nTPM: 100.5
Sample A Male 100.5
Sample B Male 105.3
Sample C Female 118.5
Sample D Female 106.3
Hippocampal formation
nTPM: 165.4
Samples: 4

Max nTPM: 179.1
Min nTPM: 154.4
Sample A Male 154.4
Sample B Male 169.5
Sample C Female 179.1
Sample D Female 158.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
69170240 Antisense, RP_050321_04_G11, Mouse strain C57BL/6J (56 days, male) 9.7
71211608 Antisense, RP_050816_01_H09, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

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