HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.8 nTPM
HPA:12.8 nTPM
GTEx:11.5 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:11.6 nTPM
Mouse:18.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.8
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
2529 Female, age 94, left hemisphere 14.1
2621 Female, age 67, right hemisphere 13.1
1911 Female, age 85, right hemisphere 12.7
1855 Male, age 76, left hemisphere 11.4
2148 Female, age 91, left hemisphere 10.9
1898 Male, age 80, left hemisphere 10.7
Dentate gyrus
nTPM: 12.4
2530 Female, age 94, left hemisphere 16.5
2531 Female, age 67, both hemispheres 13.9
2528 Male, age 74, both hemispheres 11.5
2010 Male, age 76, both hemispheres 11.3
1927 Female, age 91, both hemispheres 10.6
2246 Female, age 85, both hemispheres 10.6
Entorhinal gyrus
nTPM: 10.2
2686 Male, age 75, right hemisphere 11.8
1787 Male, age 76, left hemisphere 11.3
2117 Female, age 91, right hemisphere 9.9
1938 Female, age 85, left hemisphere 9.6
2613 Female, age 94, left hemisphere 9.6
2764 Male, age 80, right hemisphere 8.9
Hippocampus, CA1
nTPM: 10.6
2527 Male, age 74, both hemispheres 12.2
1873 Female, age 85, both hemispheres 10.9
2045 Male, age 76, both hemispheres 10.8
2749 Male, age 80, left hemisphere 9.7
2082 Female, age 91, right hemisphere 9.3
Hippocampus, CA2
nTPM: 11.9
2437 Female, age 94, left hemisphere 15.2
1963 Male, age 80, left hemisphere 13.1
2249 Male, age 74, both hemispheres 11.1
2113 Female, age 91, right hemisphere 11.0
1892 Male, age 76, both hemispheres 10.9
1940 Female, age 85, left hemisphere 10.4
Hippocampus, CA3
nTPM: 12.8
2861 Female, age 67, both hemispheres 18.2
1867 Male, age 76, both hemispheres 13.5
1891 Female, age 85, both hemispheres 12.4
2137 Male, age 80, left hemisphere 11.1
2620 Female, age 94, left hemisphere 10.9
2436 Male, age 74, both hemispheres 10.8
Parahippocampal cortex
nTPM: 11.6
2018 Male, age 76, both hemispheres 17.3
2622 Female, age 67, right hemisphere 12.0
2532 Female, age 72, left hemisphere 11.7
1850 Male, age 80, both hemispheres 11.4
2245 Female, age 91, both hemispheres 11.2
2693 Female, age 94, both hemispheres 11.2
2692 Male, age 74, both hemispheres 10.8
1933 Female, age 85, both hemispheres 10.4
2250 Female, age 67, right hemisphere 10.0
1990 Female, age 91, right hemisphere 9.9
Perirhinal gyrus
nTPM: 11.9
1841 Female, age 85, right hemisphere 14.5
1794 Male, age 80, right hemisphere 12.7
2848 Male, age 76, right hemisphere 12.5
2521 Female, age 94, right hemisphere 10.6
1847 Female, age 91, left hemisphere 9.5
Subiculum
nTPM: 11.4
2042 Male, age 76, both hemispheres 13.2
2438 Female, age 94, left hemisphere 13.1
2619 Male, age 74, both hemispheres 11.7
2729 Female, age 91, right hemisphere 10.6
1901 Male, age 80, both hemispheres 10.0
1977 Female, age 85, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.5
Samples: 197

Max nTPM: 42.6
Min nTPM: 1.4
Std nTPM: 6.6
Median nTPM: 10.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 42.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 41.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 39.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 35.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 27.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 24.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 23.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 22.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 22.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 22.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 21.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.9
FF:10153-102I9 76 years, female 19.1
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.5
Sample A Female 8.5
Sample B Female 7.5
Sample C Male 10.9
Sample D Male 7.5
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.5
Sample A Female 11.5
Sample B Female 12.5
Sample C Male 13.0
Sample D Male 9.5
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.0
Sample A Female 10.5
Sample B Female 6.0
Sample C Male 8.7
Sample D Male 9.2
Ventral hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 13.3
Min nTPM: 7.9
Sample A Female 8.1
Sample B Female 7.9
Sample C Male 13.3
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.6
Sample A Male 21.2
Sample B Male 16.6
Sample C Female 18.6
Sample D Female 18.9
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 15.7
Min nTPM: 12.1
Sample A Male 15.7
Sample B Male 14.8
Sample C Female 12.1
Sample D Female 13.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69236742 Antisense, RP_050331_01_A08, Mouse strain C57BL/6J (56 days, male) 0.4
73907496 Antisense, RP_051214_03_A02, Mouse strain C57BL/6J (56 days, male) 0.1

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