HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:29.7 nTPM
HPA:29.7 nTPM
GTEx:22.0 nTPM
FANTOM5:129.6 Scaled Tags Per Million
Pig:31.6 nTPM
Mouse:40.5 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006035
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.7
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
2148 Female, age 91, left hemisphere 21.3
2621 Female, age 67, right hemisphere 18.3
1911 Female, age 85, right hemisphere 17.6
1898 Male, age 80, left hemisphere 14.5
2529 Female, age 94, left hemisphere 9.8
1855 Male, age 76, left hemisphere 9.2
Dentate gyrus
nTPM: 19.3
2531 Female, age 67, both hemispheres 37.1
2246 Female, age 85, both hemispheres 28.4
1927 Female, age 91, both hemispheres 18.0
2528 Male, age 74, both hemispheres 14.7
2010 Male, age 76, both hemispheres 11.6
2530 Female, age 94, left hemisphere 5.7
Entorhinal gyrus
nTPM: 22.3
2613 Female, age 94, left hemisphere 35.2
2764 Male, age 80, right hemisphere 27.6
1938 Female, age 85, left hemisphere 25.6
2686 Male, age 75, right hemisphere 22.0
2117 Female, age 91, right hemisphere 12.8
1787 Male, age 76, left hemisphere 10.9
Hippocampus, CA1
nTPM: 23.8
2749 Male, age 80, left hemisphere 36.9
2045 Male, age 76, both hemispheres 23.8
2082 Female, age 91, right hemisphere 23.7
2527 Male, age 74, both hemispheres 18.8
1873 Female, age 85, both hemispheres 16.1
Hippocampus, CA2
nTPM: 13.6
1940 Female, age 85, left hemisphere 22.0
2113 Female, age 91, right hemisphere 19.1
2249 Male, age 74, both hemispheres 17.1
2437 Female, age 94, left hemisphere 9.1
1963 Male, age 80, left hemisphere 8.8
1892 Male, age 76, both hemispheres 5.5
Hippocampus, CA3
nTPM: 26.6
2137 Male, age 80, left hemisphere 44.6
2620 Female, age 94, left hemisphere 35.3
2861 Female, age 67, both hemispheres 30.7
2436 Male, age 74, both hemispheres 22.3
1891 Female, age 85, both hemispheres 13.8
1867 Male, age 76, both hemispheres 13.2
Parahippocampal cortex
nTPM: 25.5
2532 Female, age 72, left hemisphere 36.9
2622 Female, age 67, right hemisphere 35.2
1933 Female, age 85, both hemispheres 30.4
2693 Female, age 94, both hemispheres 27.6
1850 Male, age 80, both hemispheres 27.2
2245 Female, age 91, both hemispheres 26.2
1990 Female, age 91, right hemisphere 21.1
2250 Female, age 67, right hemisphere 19.7
2018 Male, age 76, both hemispheres 17.0
2692 Male, age 74, both hemispheres 14.0
Perirhinal gyrus
nTPM: 29.7
1841 Female, age 85, right hemisphere 38.9
1794 Male, age 80, right hemisphere 35.3
1847 Female, age 91, left hemisphere 31.8
2521 Female, age 94, right hemisphere 29.7
2848 Male, age 76, right hemisphere 12.8
Subiculum
nTPM: 16.0
1977 Female, age 85, both hemispheres 23.4
1901 Male, age 80, both hemispheres 19.9
2729 Female, age 91, right hemisphere 16.6
2042 Male, age 76, both hemispheres 13.5
2619 Male, age 74, both hemispheres 11.9
2438 Female, age 94, left hemisphere 10.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.0
Samples: 197

Max nTPM: 74.1
Min nTPM: 4.2
Std nTPM: 11.1
Median nTPM: 20.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 74.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 70.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 58.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 56.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 53.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 52.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 51.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 49.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 47.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 42.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 129.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 129.6
FF:10169-103B7 60 years, female 148.5
FF:10153-102I9 76 years, female 110.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 26.1
Min nTPM: 19.0
Sample A Female 25.8
Sample B Female 26.1
Sample C Male 19.0
Sample D Male 19.4
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 37.7
Min nTPM: 28.6
Sample A Female 37.7
Sample B Female 29.9
Sample C Male 30.1
Sample D Male 28.6
Subiculum
nTPM: 25.5
Samples: 4

Max nTPM: 33.3
Min nTPM: 21.1
Sample A Female 33.3
Sample B Female 21.6
Sample C Male 26.1
Sample D Male 21.1
Ventral hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 30.0
Min nTPM: 18.4
Sample A Female 19.4
Sample B Female 18.4
Sample C Male 30.0
Sample D Male 29.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.2
Samples: 4

Max nTPM: 39.8
Min nTPM: 30.6
Sample A Male 30.6
Sample B Male 33.2
Sample C Female 33.1
Sample D Female 39.8
Hippocampal formation
nTPM: 40.5
Samples: 4

Max nTPM: 46.7
Min nTPM: 29.1
Sample A Male 29.1
Sample B Male 41.7
Sample C Female 46.7
Sample D Female 44.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
74514369 Antisense, RP_060208_02_D06, Mouse strain C57BL/6J (56 days, male) 11.9

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