HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.3 nTPM
HPA:12.3 nTPM
GTEx:28.5 nTPM
FANTOM5:84.4 Scaled Tags Per Million
Pig:27.5 nTPM
Mouse:23.4 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072449Antibody CAB070124
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.3
Sample id Sample description nTPM
Hippocampus
nTPM: 8.3
1911 Female, age 85, right hemisphere 11.2
2529 Female, age 94, left hemisphere 9.5
2621 Female, age 67, right hemisphere 8.3
1898 Male, age 80, left hemisphere 7.4
1855 Male, age 76, left hemisphere 7.0
2148 Female, age 91, left hemisphere 6.2
Dentate gyrus
nTPM: 8.9
2530 Female, age 94, left hemisphere 11.0
2246 Female, age 85, both hemispheres 10.7
2531 Female, age 67, both hemispheres 9.8
2010 Male, age 76, both hemispheres 9.1
1927 Female, age 91, both hemispheres 6.8
2528 Male, age 74, both hemispheres 6.0
Entorhinal gyrus
nTPM: 7.1
1787 Male, age 76, left hemisphere 8.3
2117 Female, age 91, right hemisphere 8.1
2764 Male, age 80, right hemisphere 7.9
2613 Female, age 94, left hemisphere 6.7
2686 Male, age 75, right hemisphere 6.3
1938 Female, age 85, left hemisphere 5.3
Hippocampus, CA1
nTPM: 9.6
2749 Male, age 80, left hemisphere 14.6
2527 Male, age 74, both hemispheres 10.4
2045 Male, age 76, both hemispheres 9.8
2082 Female, age 91, right hemisphere 8.2
1873 Female, age 85, both hemispheres 4.9
Hippocampus, CA2
nTPM: 9.3
2113 Female, age 91, right hemisphere 11.8
2249 Male, age 74, both hemispheres 11.4
2437 Female, age 94, left hemisphere 9.9
1963 Male, age 80, left hemisphere 9.6
1892 Male, age 76, both hemispheres 6.5
1940 Female, age 85, left hemisphere 6.4
Hippocampus, CA3
nTPM: 12.3
2436 Male, age 74, both hemispheres 20.2
2137 Male, age 80, left hemisphere 16.1
2861 Female, age 67, both hemispheres 11.5
2620 Female, age 94, left hemisphere 10.0
1867 Male, age 76, both hemispheres 9.8
1891 Female, age 85, both hemispheres 6.4
Parahippocampal cortex
nTPM: 6.5
2532 Female, age 72, left hemisphere 9.3
2018 Male, age 76, both hemispheres 9.1
2245 Female, age 91, both hemispheres 8.4
2622 Female, age 67, right hemisphere 8.0
1933 Female, age 85, both hemispheres 5.8
1990 Female, age 91, right hemisphere 5.6
2693 Female, age 94, both hemispheres 5.1
2250 Female, age 67, right hemisphere 4.9
2692 Male, age 74, both hemispheres 4.9
1850 Male, age 80, both hemispheres 4.0
Perirhinal gyrus
nTPM: 6.1
1794 Male, age 80, right hemisphere 9.6
1847 Female, age 91, left hemisphere 6.5
2521 Female, age 94, right hemisphere 5.2
1841 Female, age 85, right hemisphere 4.5
2848 Male, age 76, right hemisphere 4.4
Subiculum
nTPM: 9.0
2042 Male, age 76, both hemispheres 13.8
2438 Female, age 94, left hemisphere 12.1
1901 Male, age 80, both hemispheres 8.1
1977 Female, age 85, both hemispheres 7.6
2619 Male, age 74, both hemispheres 6.5
2729 Female, age 91, right hemisphere 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.5
Samples: 197

Max nTPM: 60.7
Min nTPM: 12.8
Std nTPM: 8.9
Median nTPM: 27.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 60.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 60.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 59.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 57.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 51.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 49.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 48.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 48.2
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 47.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 47.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 44.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.4
FF:10153-102I9 76 years, female 123.9
FF:10169-103B7 60 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 30.2
Min nTPM: 23.4
Sample A Female 28.5
Sample B Female 30.2
Sample C Male 28.2
Sample D Male 23.4
Entorhinal cortex
nTPM: 24.6
Samples: 4

Max nTPM: 28.3
Min nTPM: 21.8
Sample A Female 25.0
Sample B Female 23.1
Sample C Male 28.3
Sample D Male 21.8
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.6
Sample A Female 27.5
Sample B Female 22.6
Sample C Male 24.7
Sample D Male 22.9
Ventral hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 30.0
Min nTPM: 19.7
Sample A Female 25.9
Sample B Female 19.7
Sample C Male 30.0
Sample D Male 27.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 18.4
Min nTPM: 14.0
Sample A Male 15.2
Sample B Male 14.0
Sample C Female 18.4
Sample D Female 15.7
Hippocampal formation
nTPM: 23.4
Samples: 4

Max nTPM: 28.8
Min nTPM: 19.2
Sample A Male 19.2
Sample B Male 22.9
Sample C Female 28.8
Sample D Female 22.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
2551 Antisense, RP_040420_01_B10, Mouse strain C57BL/6J (56 days, male) 3.2
2552 Antisense, RP_040420_01_B10, Mouse strain C57BL/6J (56 days, male) 2.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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