COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:50.4 nTPM
HPA:11.1 nTPM
GTEx:50.4 nTPM
FANTOM5:12.8 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 11.1
overview
Male, age 54 		Colon sample 67
nTPM: 8.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 7.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 9.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 8.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 7.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 25.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 6.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 17.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 10
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 11.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 50.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 50.4
Samples: 373

Max nTPM: 153.9
Min nTPM: 8.5
Std nTPM: 16.4
Median nTPM: 49.4
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 153.9
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 127.8
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 110.3
GTEX-144GM-1126-SM-79OJK 20-29 years, male 108.7
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 107.1
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 101.5
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 100.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 97.6
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 95.9
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 95.3
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 87.3
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Colon - Transverse
Average nTPM: 28.4
Samples: 406

Max nTPM: 91.2
Min nTPM: 5.1
Std nTPM: 16.8
Median nTPM: 24.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 91.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 87.5
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 78.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 76.4
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 74.4
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 73.5
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 70.7
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 67.4
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 67.3
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 66.9
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 64.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 12.8
FF:10014-101C5 62,83,84 years, mixed 12.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.