HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:96.9 nTPM
HPA:96.9 nTPM
GTEx:72.1 nTPM
FANTOM5:63.3 Scaled Tags Per Million
Pig:54.0 nTPM
Mouse:122.5 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011993Antibody HPA011994
Glial cells LowMedium
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.9
Sample id Sample description nTPM
Hippocampus
nTPM: 85.3
2621 Female, age 67, right hemisphere 91.1
2529 Female, age 94, left hemisphere 86.2
1911 Female, age 85, right hemisphere 85.6
2148 Female, age 91, left hemisphere 83.7
1855 Male, age 76, left hemisphere 83.5
1898 Male, age 80, left hemisphere 81.9
Dentate gyrus
nTPM: 79.7
2530 Female, age 94, left hemisphere 87.9
2246 Female, age 85, both hemispheres 82.9
1927 Female, age 91, both hemispheres 80.0
2010 Male, age 76, both hemispheres 77.1
2531 Female, age 67, both hemispheres 76.1
2528 Male, age 74, both hemispheres 74.1
Entorhinal gyrus
nTPM: 96.9
2613 Female, age 94, left hemisphere 107.8
2686 Male, age 75, right hemisphere 105.7
1938 Female, age 85, left hemisphere 98.2
2117 Female, age 91, right hemisphere 91.6
1787 Male, age 76, left hemisphere 90.1
2764 Male, age 80, right hemisphere 88.3
Hippocampus, CA1
nTPM: 82.4
2749 Male, age 80, left hemisphere 94.5
1873 Female, age 85, both hemispheres 87.1
2527 Male, age 74, both hemispheres 86.4
2082 Female, age 91, right hemisphere 74.9
2045 Male, age 76, both hemispheres 69.2
Hippocampus, CA2
nTPM: 88.7
1963 Male, age 80, left hemisphere 108.4
2437 Female, age 94, left hemisphere 92.1
1940 Female, age 85, left hemisphere 87.9
1892 Male, age 76, both hemispheres 87.6
2113 Female, age 91, right hemisphere 80.7
2249 Male, age 74, both hemispheres 75.2
Hippocampus, CA3
nTPM: 81.8
2137 Male, age 80, left hemisphere 93.9
2861 Female, age 67, both hemispheres 91.1
1867 Male, age 76, both hemispheres 80.4
1891 Female, age 85, both hemispheres 80.1
2620 Female, age 94, left hemisphere 74.4
2436 Male, age 74, both hemispheres 70.7
Parahippocampal cortex
nTPM: 93.9
2622 Female, age 67, right hemisphere 118.6
2692 Male, age 74, both hemispheres 105.3
1933 Female, age 85, both hemispheres 95.6
1850 Male, age 80, both hemispheres 95.5
2532 Female, age 72, left hemisphere 94.3
1990 Female, age 91, right hemisphere 90.2
2245 Female, age 91, both hemispheres 89.9
2693 Female, age 94, both hemispheres 88.5
2250 Female, age 67, right hemisphere 84.4
2018 Male, age 76, both hemispheres 76.6
Perirhinal gyrus
nTPM: 88.5
1841 Female, age 85, right hemisphere 97.9
1794 Male, age 80, right hemisphere 96.9
1847 Female, age 91, left hemisphere 88.2
2521 Female, age 94, right hemisphere 80.5
2848 Male, age 76, right hemisphere 79.1
Subiculum
nTPM: 83.3
2619 Male, age 74, both hemispheres 96.6
2438 Female, age 94, left hemisphere 87.5
1977 Female, age 85, both hemispheres 84.7
1901 Male, age 80, both hemispheres 77.4
2729 Female, age 91, right hemisphere 77.4
2042 Male, age 76, both hemispheres 76.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.1
Samples: 197

Max nTPM: 174.3
Min nTPM: 24.1
Std nTPM: 27.0
Median nTPM: 67.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 174.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 171.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 144.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 141.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 136.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 131.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 131.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 127.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 127.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 126.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 125.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.3
FF:10153-102I9 76 years, female 81.7
FF:10169-103B7 60 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.5
Samples: 4

Max nTPM: 55.1
Min nTPM: 37.5
Sample A Female 55.1
Sample B Female 49.4
Sample C Male 44.1
Sample D Male 37.5
Entorhinal cortex
nTPM: 54.0
Samples: 4

Max nTPM: 61.0
Min nTPM: 41.4
Sample A Female 54.6
Sample B Female 61.0
Sample C Male 58.9
Sample D Male 41.4
Subiculum
nTPM: 51.6
Samples: 4

Max nTPM: 61.0
Min nTPM: 41.7
Sample A Female 61.0
Sample B Female 55.0
Sample C Male 48.6
Sample D Male 41.7
Ventral hippocampus
nTPM: 48.1
Samples: 4

Max nTPM: 65.2
Min nTPM: 40.5
Sample A Female 44.0
Sample B Female 42.7
Sample C Male 65.2
Sample D Male 40.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 122.6
Samples: 4

Max nTPM: 135.1
Min nTPM: 105.1
Sample A Male 135.1
Sample B Male 132.2
Sample C Female 117.8
Sample D Female 105.1
Hippocampal formation
nTPM: 113.8
Samples: 4

Max nTPM: 121.0
Min nTPM: 106.2
Sample A Male 121.0
Sample B Male 106.2
Sample C Female 120.5
Sample D Female 107.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69015242 Antisense, RP_050310_02_E11, Mouse strain C57BL/6J (56 days, male) 9.0
72129243 Antisense, RP_051017_03_E03, Mouse strain C57BL/6J (56 days, male) 4.7

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