HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:15.6 nTPM
HPA:15.6 nTPM
GTEx:13.8 nTPM
FANTOM5:28.0 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:17.4 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.6
Sample id Sample description nTPM
Hippocampus
nTPM: 12.9
2148 Female, age 91, left hemisphere 18.5
1898 Male, age 80, left hemisphere 14.6
2621 Female, age 67, right hemisphere 12.1
1855 Male, age 76, left hemisphere 11.8
2529 Female, age 94, left hemisphere 10.7
1911 Female, age 85, right hemisphere 9.9
Dentate gyrus
nTPM: 12.7
2531 Female, age 67, both hemispheres 16.1
2528 Male, age 74, both hemispheres 14.5
1927 Female, age 91, both hemispheres 13.2
2010 Male, age 76, both hemispheres 12.3
2246 Female, age 85, both hemispheres 10.2
2530 Female, age 94, left hemisphere 10.2
Entorhinal gyrus
nTPM: 15.6
2764 Male, age 80, right hemisphere 23.0
2613 Female, age 94, left hemisphere 16.1
2686 Male, age 75, right hemisphere 15.4
1787 Male, age 76, left hemisphere 13.5
2117 Female, age 91, right hemisphere 12.9
1938 Female, age 85, left hemisphere 12.6
Hippocampus, CA1
nTPM: 14.1
2045 Male, age 76, both hemispheres 16.2
2527 Male, age 74, both hemispheres 14.5
1873 Female, age 85, both hemispheres 13.9
2082 Female, age 91, right hemisphere 13.1
2749 Male, age 80, left hemisphere 13.1
Hippocampus, CA2
nTPM: 12.9
1940 Female, age 85, left hemisphere 19.0
2249 Male, age 74, both hemispheres 14.2
1963 Male, age 80, left hemisphere 12.4
2113 Female, age 91, right hemisphere 11.9
1892 Male, age 76, both hemispheres 10.8
2437 Female, age 94, left hemisphere 9.1
Hippocampus, CA3
nTPM: 15.5
2861 Female, age 67, both hemispheres 27.8
2620 Female, age 94, left hemisphere 22.6
1867 Male, age 76, both hemispheres 12.3
1891 Female, age 85, both hemispheres 10.5
2137 Male, age 80, left hemisphere 10.5
2436 Male, age 74, both hemispheres 9.4
Parahippocampal cortex
nTPM: 14.6
2622 Female, age 67, right hemisphere 21.9
2018 Male, age 76, both hemispheres 19.9
1933 Female, age 85, both hemispheres 15.8
1850 Male, age 80, both hemispheres 14.8
2532 Female, age 72, left hemisphere 13.5
1990 Female, age 91, right hemisphere 13.3
2693 Female, age 94, both hemispheres 12.5
2245 Female, age 91, both hemispheres 12.2
2692 Male, age 74, both hemispheres 11.4
2250 Female, age 67, right hemisphere 10.4
Perirhinal gyrus
nTPM: 14.1
1794 Male, age 80, right hemisphere 17.7
1847 Female, age 91, left hemisphere 14.7
2848 Male, age 76, right hemisphere 13.0
2521 Female, age 94, right hemisphere 12.8
1841 Female, age 85, right hemisphere 12.3
Subiculum
nTPM: 12.3
2729 Female, age 91, right hemisphere 21.0
2619 Male, age 74, both hemispheres 16.1
1901 Male, age 80, both hemispheres 11.1
2042 Male, age 76, both hemispheres 10.8
1977 Female, age 85, both hemispheres 9.8
2438 Female, age 94, left hemisphere 4.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 22.7
Min nTPM: 3.9
Std nTPM: 3.7
Median nTPM: 13.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 22.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 22.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 22.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 22.3
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 22.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 21.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 20.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 20.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 20.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 20.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 20.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.0
FF:10153-102I9 76 years, female 31.9
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.0
Sample A Female 7.1
Sample B Female 6.5
Sample C Male 7.2
Sample D Male 5.0
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.4
Sample A Female 9.4
Sample B Female 9.5
Sample C Male 11.8
Sample D Male 9.5
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.5
Sample A Female 10.7
Sample B Female 7.5
Sample C Male 8.1
Sample D Male 8.1
Ventral hippocampus
nTPM: 7.7
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.3
Sample A Female 7.1
Sample B Female 6.3
Sample C Male 9.1
Sample D Male 8.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 18.4
Min nTPM: 15.6
Sample A Male 18.2
Sample B Male 18.4
Sample C Female 15.6
Sample D Female 17.4
Hippocampal formation
nTPM: 12.9
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.5
Sample A Male 13.9
Sample B Male 13.2
Sample C Female 11.5
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
69528553 Antisense, RP_050421_03_B11, Mouse strain C57BL/6J (56 days, male) 1.5

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