AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		66.315
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:89.2 nTPM
HPA:89.2 nTPM
GTEx:206.1 nTPM
FANTOM5:1391.5 Scaled Tags Per Million
Pig:447.1 nTPM
Mouse:668.4 nTPM
Allen mouse:22.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA012828
Amygdala mean intensity 66.315
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 66.315
Basal medial amygdaloid nucleus 29.961
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 21.600
Cortical amygdala 51.595
Central amygdala 30.138
Medial amygdaloid nucleus 28.137

AMYGDALA - HPA Brain RNA-seq
Max nTPM 89.2
Sample id Sample description nTPM
Amygdala
nTPM: 12.0
1987 Female, age 91, left hemisphere 52.7
2517 Female, age 94, left hemisphere 7.7
2514 Male, age 75, right hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 59.9
2243 Female, age 91, right hemisphere 187.0
2110 Male, age 80, left hemisphere 104.8
2685 Female, age 94, left hemisphere 57.3
1955 Male, age 76, both hemispheres 10.3
2609 Male, age 75, right hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 29.5
2239 Male, age 80, left hemisphere 82.7
2701 Female, age 91, right hemisphere 64.7
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 84.2
2829 Male, age 80, left hemisphere 163.4
2242 Female, age 91, right hemisphere 157.2
2429 Female, age 94, left hemisphere 76.5
2535 Female, age 67, right hemisphere 63.5
2240 Male, age 76, both hemispheres 44.7
2428 Male, age 75, right hemisphere 0.0
Lateral amygdala
nTPM: 7.3
2255 Female, age 91, right hemisphere 43.9
1883 Male, age 76, both hemispheres 0.0
2256 Male, age 80, left hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
2534 Female, age 94, left hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 89.2
1974 Female, age 91, both hemispheres 122.8
2486 Female, age 94, both hemispheres 103.4
2201 Male, age 74, unknown 41.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 206.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 206.1
Samples: 152

Max nTPM: 505.7
Min nTPM: 16.0
Std nTPM: 119.1
Median nTPM: 173.4
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 505.7
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 499.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 493.5
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 483.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 477.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 458.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 448.4
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 428.0
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 425.8
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 420.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 415.7
Show allShow less

AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 1391.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 1391.5
FF:10151-102I7 76 years, female 1391.5

AMYGDALA - Pig RNA-seqi
Average nTPM 447.1
Pig sample Sample description nTPM
Amygdala
nTPM: 447.1
Samples: 4

Max nTPM: 536.6
Min nTPM: 352.4
Sample A Female 536.6
Sample B Female 352.4
Sample C Male 420.3
Sample D Male 479.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 668.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 668.5
Samples: 4

Max nTPM: 688.0
Min nTPM: 642.0
Sample A Male 675.2
Sample B Male 642.0
Sample C Female 668.6
Sample D Female 688.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 22.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 22.8
74272037 Antisense, RP_060202_01_A04, Mouse strain C57BL/6J (56 days, male) 24.2
69549641 Antisense, RP_050309_02_D02, Mouse strain C57BL/6J (56 days, male) 21.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.