HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.3 nTPM
HPA:18.3 nTPM
GTEx:21.3 nTPM
FANTOM5:134.5 Scaled Tags Per Million
Pig:58.2 nTPM
Mouse:74.9 nTPM
Allen mouse:14.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028869Antibody CAB033212Antibody CAB033515
Glial cells MediumMediumMedium
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.6
1898 Male, age 80, left hemisphere 18.8
1855 Male, age 76, left hemisphere 13.8
2621 Female, age 67, right hemisphere 12.1
2529 Female, age 94, left hemisphere 11.9
1911 Female, age 85, right hemisphere 10.3
2148 Female, age 91, left hemisphere 8.5
Dentate gyrus
nTPM: 12.2
1927 Female, age 91, both hemispheres 16.2
2010 Male, age 76, both hemispheres 15.4
2246 Female, age 85, both hemispheres 13.1
2530 Female, age 94, left hemisphere 12.9
2531 Female, age 67, both hemispheres 10.0
2528 Male, age 74, both hemispheres 5.6
Entorhinal gyrus
nTPM: 11.2
1938 Female, age 85, left hemisphere 17.2
1787 Male, age 76, left hemisphere 12.2
2764 Male, age 80, right hemisphere 12.1
2686 Male, age 75, right hemisphere 9.9
2613 Female, age 94, left hemisphere 9.0
2117 Female, age 91, right hemisphere 6.8
Hippocampus, CA1
nTPM: 15.4
2749 Male, age 80, left hemisphere 25.6
1873 Female, age 85, both hemispheres 16.3
2045 Male, age 76, both hemispheres 14.9
2527 Male, age 74, both hemispheres 11.8
2082 Female, age 91, right hemisphere 8.2
Hippocampus, CA2
nTPM: 12.0
1892 Male, age 76, both hemispheres 20.5
1963 Male, age 80, left hemisphere 13.0
1940 Female, age 85, left hemisphere 12.1
2437 Female, age 94, left hemisphere 11.0
2113 Female, age 91, right hemisphere 8.7
2249 Male, age 74, both hemispheres 7.0
Hippocampus, CA3
nTPM: 14.2
2137 Male, age 80, left hemisphere 21.7
1867 Male, age 76, both hemispheres 16.7
2861 Female, age 67, both hemispheres 12.8
1891 Female, age 85, both hemispheres 12.6
2436 Male, age 74, both hemispheres 11.1
2620 Female, age 94, left hemisphere 10.1
Parahippocampal cortex
nTPM: 13.8
1850 Male, age 80, both hemispheres 21.8
2245 Female, age 91, both hemispheres 17.9
2693 Female, age 94, both hemispheres 15.2
1933 Female, age 85, both hemispheres 14.8
1990 Female, age 91, right hemisphere 13.8
2532 Female, age 72, left hemisphere 12.5
2250 Female, age 67, right hemisphere 12.0
2018 Male, age 76, both hemispheres 11.3
2692 Male, age 74, both hemispheres 9.7
2622 Female, age 67, right hemisphere 9.0
Perirhinal gyrus
nTPM: 18.3
1847 Female, age 91, left hemisphere 20.1
1841 Female, age 85, right hemisphere 19.4
2848 Male, age 76, right hemisphere 18.0
1794 Male, age 80, right hemisphere 17.2
2521 Female, age 94, right hemisphere 16.8
Subiculum
nTPM: 11.9
2438 Female, age 94, left hemisphere 17.6
1901 Male, age 80, both hemispheres 17.3
1977 Female, age 85, both hemispheres 11.2
2042 Male, age 76, both hemispheres 10.5
2619 Male, age 74, both hemispheres 7.9
2729 Female, age 91, right hemisphere 6.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.3
Samples: 197

Max nTPM: 47.9
Min nTPM: 9.7
Std nTPM: 6.8
Median nTPM: 19.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 36.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 36.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 36.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 36.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 34.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 34.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 33.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 33.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 134.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 134.5
FF:10169-103B7 60 years, female 134.9
FF:10153-102I9 76 years, female 134.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.2
Samples: 4

Max nTPM: 67.6
Min nTPM: 46.3
Sample A Female 67.6
Sample B Female 57.9
Sample C Male 61.0
Sample D Male 46.3
Entorhinal cortex
nTPM: 50.2
Samples: 4

Max nTPM: 57.2
Min nTPM: 45.7
Sample A Female 48.7
Sample B Female 57.2
Sample C Male 49.3
Sample D Male 45.7
Subiculum
nTPM: 48.1
Samples: 4

Max nTPM: 59.9
Min nTPM: 42.0
Sample A Female 59.9
Sample B Female 42.0
Sample C Male 45.8
Sample D Male 44.7
Ventral hippocampus
nTPM: 47.7
Samples: 4

Max nTPM: 57.0
Min nTPM: 39.5
Sample A Female 52.5
Sample B Female 39.5
Sample C Male 41.9
Sample D Male 57.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.1
Samples: 4

Max nTPM: 75.1
Min nTPM: 64.8
Sample A Male 64.8
Sample B Male 74.2
Sample C Female 74.3
Sample D Female 75.1
Hippocampal formation
nTPM: 74.9
Samples: 4

Max nTPM: 81.4
Min nTPM: 69.1
Sample A Male 81.4
Sample B Male 74.6
Sample C Female 74.6
Sample D Female 69.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
73817935 Antisense, RP_051214_01_A06, Mouse strain C57BL/6J (56 days, male) 15.6
632510 Antisense, RP_040907_01_F08, Mouse strain C57BL/6J (56 days, male) 13.6

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The Human Protein Atlas

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