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RBFOX1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:28.1 nTPM
HPA:28.1 nTPM
GTEx:58.7 nTPM
FANTOM5:309.9 Scaled Tags Per Million
Pig:127.4 nTPM
Mouse:197.5 nTPM
Allen mouse:7.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040809Antibody HPA075862
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 28.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 27.6
2846 Female, age 79, unknown 47.0
2290 Female, age 72, unknown 45.0
1857 Female, age 85, left hemisphere 44.0
1854 Male, age 80, left hemisphere 32.3
1781 Male, age 74, unknown 21.4
2289 Male, age 61, right hemisphere 15.6
2288 Male, age 75, left hemisphere 15.5
2481 Female, age 94, left hemisphere 0.0
Claustrum
nTPM: 3.0
2568 Male, age 61, both hemispheres 12.6
2284 Female, age 91, both hemispheres 9.2
2645 Female, age 72, unknown 5.5
1956 Male, age 74, unknown 0.0
2196 Female, age 79, unknown 0.0
2198 Male, age 80, both hemispheres 0.0
2292 Female, age 85, both hemispheres 0.0
2392 Female, age 94, both hemispheres 0.0
2491 Male, age 75, both hemispheres 0.0
Globus pallidus, externus
nTPM: 0.0
1996 Male, age 80, right hemisphere 0.0
2395 Male, age 75, both hemispheres 0.0
2567 Female, age 72, unknown 0.0
2646 Male, age 61, right hemisphere 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.0
1818 Male, age 74, unknown 0.0
2037 Male, age 80, right hemisphere 0.0
2111 Female, age 85, right hemisphere 0.0
2287 Male, age 75, right hemisphere 0.0
2483 Female, age 94, right hemisphere 0.0
2566 Female, age 72, unknown 0.0
2778 Female, age 91, both hemispheres 0.0
Nucleus accumbens
nTPM: 23.5
1856 Female, age 91, right hemisphere 64.5
2824 Male, age 61, right hemisphere 39.3
1783 Male, age 74, unknown 32.4
1806 Female, age 85, left hemisphere 26.1
2698 Female, age 72, unknown 14.3
2286 Male, age 75, left hemisphere 11.6
2391 Female, age 94, left hemisphere 0.0
2732 Male, age 80, right hemisphere 0.0
Nucleus basalis of Meynert
nTPM: 10.5
2393 Male, age 80, right hemisphere 23.8
2484 Female, age 94, left hemisphere 18.3
2569 Male, age 61, both hemispheres 0.0
2821 Male, age 75, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 2.7
2029 Male, age 61, right hemisphere 12.5
1812 Female, age 91, both hemispheres 1.0
1979 Male, age 74, unknown 0.0
2195 Female, age 85, both hemispheres 0.0
2775 Male, age 80, right hemisphere 0.0
Olfactory tubercle
nTPM: 9.4
1998 Female, age 91, both hemispheres 27.0
2856 Male, age 75, right hemisphere 10.2
2487 Female, age 94, left hemisphere 0.3
1846 Male, age 80, right hemisphere 0.0
Putamen
nTPM: 28.1
1838 Male, age 80, right hemisphere 63.3
2466 Female, age 79, unknown 43.3
1937 Female, age 91, right hemisphere 40.4
1829 Male, age 74, unknown 35.8
2489 Female, age 72, unknown 14.0
2482 Female, age 94, left hemisphere 0.0
2647 Male, age 75, left hemisphere 0.0
Septal nuclei
nTPM: 1.5
1960 Male, age 74, unknown 6.2
2031 Female, age 72, unknown 4.5
2009 Female, age 91, both hemispheres 0.0
2059 Female, age 85, both hemispheres 0.0
2199 Male, age 80, right hemisphere 0.0
2394 Male, age 61, left hemisphere 0.0
2629 Female, age 94, right hemisphere 0.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 58.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 57.5
Samples: 246

Max nTPM: 195.1
Min nTPM: 3.7
Std nTPM: 38.8
Median nTPM: 52.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 195.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 149.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 147.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 146.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 139.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 138.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 137.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 136.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 135.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 133.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 133.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 127.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 126.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 123.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 121.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 121.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 121.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 120.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 118.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 117.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 116.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 115.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 115.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 113.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 112.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 111.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 109.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 109.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 108.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 107.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 107.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 106.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 105.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 104.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 104.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 103.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 103.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 102.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 101.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 99.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 99.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 98.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 98.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 97.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 97.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 96.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 95.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 94.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 94.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 92.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 91.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 91.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 88.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 86.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 84.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 84.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 84.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 83.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 82.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 82.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 82.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 81.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 81.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 81.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 81.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 81.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 81.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 80.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 78.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 78.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 77.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 77.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 76.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 76.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 75.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 75.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 75.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 75.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 75.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 74.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 74.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 74.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 74.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 74.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 73.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 72.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 72.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 71.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 69.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 69.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 68.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 67.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 67.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 65.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 64.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 63.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 62.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 61.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 60.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 60.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 59.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 59.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 59.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 58.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 57.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 54.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 54.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 54.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 54.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 52.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 52.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 52.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 51.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 50.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 49.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 48.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 47.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 46.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 44.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 44.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 44.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 44.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 44.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 44.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 44.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 42.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 41.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 41.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 41.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 40.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 39.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 39.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 38.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 38.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 38.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 38.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 37.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 36.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 36.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 36.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 35.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 35.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 34.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 34.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 33.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 33.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 32.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 32.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 32.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 30.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 30.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 29.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 28.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 27.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 27.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 26.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 26.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 26.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 26.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 25.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 25.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 24.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 24.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 23.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 23.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 22.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 22.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 22.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 22.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 21.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 21.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 19.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 19.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 19.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 19.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 18.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 18.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 18.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 17.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 17.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 16.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 16.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 15.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 15.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 15.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 15.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 14.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 14.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 14.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 13.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 13.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 13.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 13.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 13.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 13.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 12.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 12.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 12.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 12.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 11.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 11.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 11.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 11.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 10.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 10.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 10.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 10.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 9.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 9.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 8.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 7.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 6.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 5.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 5.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 5.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 58.7
Samples: 246

Max nTPM: 158.5
Min nTPM: 1.4
Std nTPM: 33.5
Median nTPM: 60.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 158.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 129.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 125.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 124.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 123.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 120.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 119.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 116.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 115.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 111.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 110.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 110.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 109.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 109.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 107.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 106.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 106.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 105.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 105.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 105.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 104.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 104.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 103.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 103.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 102.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 102.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 101.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 101.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 100.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 99.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 98.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 98.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 98.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 98.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 98.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 97.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 97.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 97.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 96.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 96.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 95.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 95.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 95.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 94.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 94.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 93.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 92.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 92.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 92.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 91.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 90.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 89.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 89.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 88.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 88.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 86.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 86.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 85.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 85.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 85.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 85.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 85.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 84.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 83.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 83.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 83.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 82.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 80.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 79.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 79.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 79.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 79.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 78.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 78.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 78.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 77.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 77.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 77.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 76.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 76.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 76.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 76.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 75.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 75.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 74.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 74.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 74.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 74.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 73.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 73.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 72.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 72.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 72.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 72.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 71.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 71.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 71.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 70.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 70.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 70.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 70.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 70.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 69.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 69.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 67.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 67.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 66.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 66.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 66.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 66.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 65.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 65.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 64.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 63.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 62.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 62.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 62.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 62.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 62.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 61.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 60.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 60.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 59.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 59.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 59.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 59.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 59.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 58.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 58.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 58.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 57.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 56.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 56.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 56.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 55.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 55.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 55.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 54.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 53.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 53.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 52.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 52.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 52.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 51.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 51.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 50.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 50.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 49.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 49.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 49.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 49.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 48.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 47.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 47.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 46.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 45.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 45.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 45.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 44.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 43.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 42.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 42.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 42.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 41.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 40.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 39.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 39.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 38.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 38.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 38.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 37.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 36.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 36.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 36.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 35.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 35.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 33.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 33.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 32.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 30.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 29.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 29.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 27.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 27.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 26.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 26.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 26.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 25.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 25.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 24.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 23.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 23.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 22.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 22.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 22.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 22.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 20.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 19.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 19.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 18.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 18.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 18.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 17.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 17.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 16.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 15.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 15.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 15.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 15.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 15.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 14.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 13.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 13.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 12.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 12.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 12.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 12.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 11.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 11.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 11.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 10.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 10.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 10.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 10.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 10.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 9.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 9.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 8.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 8.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 7.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 6.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 6.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 6.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 6.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 5.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 4.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 3.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 2.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.4
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Brain - Putamen (basal ganglia)
Average nTPM: 52.2
Samples: 205

Max nTPM: 176.3
Min nTPM: 2.5
Std nTPM: 36.4
Median nTPM: 45.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 176.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 156.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 141.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 122.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 122.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 121.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 119.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 118.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 118.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 118.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 116.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 115.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 114.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 113.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 113.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 109.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 108.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 108.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 107.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 104.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 102.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 102.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 102.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 101.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 101.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 101.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 100.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 99.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 99.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 98.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 97.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 95.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 95.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 95.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 93.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 93.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 93.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 92.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 91.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 90.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 89.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 89.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 88.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 88.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 87.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 85.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 84.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 83.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 83.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 79.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 79.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 78.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 76.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 75.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 75.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 75.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 73.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 73.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 71.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 70.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 70.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 68.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 68.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 68.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 66.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 66.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 66.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 64.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 63.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 63.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 63.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 62.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 62.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 61.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 61.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 60.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 59.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 58.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 58.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 57.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 57.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 57.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 56.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 56.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 56.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 55.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 54.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 53.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 53.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 53.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 52.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 51.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 51.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 50.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 49.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 49.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 47.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 47.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 46.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 46.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 45.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 45.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 44.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 44.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 43.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 43.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 42.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 42.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 41.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 41.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 41.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 40.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 40.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 40.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 39.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 39.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 38.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 37.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 37.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 36.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 35.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 34.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 33.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 33.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 33.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 33.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 32.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 32.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 30.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 28.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 28.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 27.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 27.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 26.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 26.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 26.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 25.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 25.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 25.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 25.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 24.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 23.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 23.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 22.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 21.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 20.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 20.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 20.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 19.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 19.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 19.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 19.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 19.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 18.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 17.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 16.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 16.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 16.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 15.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 15.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 15.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 14.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 14.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 14.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 14.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 13.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 13.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 13.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 12.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 12.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 12.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 11.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 10.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 10.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 10.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 9.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 8.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 8.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 7.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 6.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 5.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 4.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 309.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 299.1
FF:10164-103B2 76 years, female 299.1
Globus pallidus
Scaled Tags Per Million: 58.5
FF:10175-103C4 60 years, female 78.9
FF:10161-103A8 76 years, female 38.1
Nucleus accumbens
Scaled Tags Per Million: 257.4
FF:10037-101F1 23-56 years, mixed 257.4
Putamen
Scaled Tags Per Million: 309.9
FF:10176-103C5 60 years, female 309.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 127.4
Pig sample Sample description nTPM
Caudate
nTPM: 98.1
Samples: 4

Max nTPM: 127.4
Min nTPM: 86.0
Sample A Female 86.0
Sample B Female 89.0
Sample C Male 127.4
Sample D Male 89.8
Putamen
nTPM: 127.4
Samples: 4

Max nTPM: 204.8
Min nTPM: 43.3
Sample A Female 43.3
Sample B Female 120.3
Sample C Male 204.8
Sample D Male 141.1
Septum
nTPM: 49.7
Samples: 4

Max nTPM: 70.1
Min nTPM: 20.8
Sample A Female 62.6
Sample B Female 70.1
Sample C Male 20.8
Sample D Male 45.3
Ventral pallidum
nTPM: 73.3
Samples: 4

Max nTPM: 108.1
Min nTPM: 43.1
Sample A Female 74.1
Sample B Female 108.1
Sample C Male 43.1
Sample D Male 67.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 197.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 197.6
Samples: 4

Max nTPM: 216.1
Min nTPM: 178.7
Sample A Male 213.8
Sample B Male 216.1
Sample C Female 178.7
Sample D Female 181.6
Septum
nTPM: 75.1
Samples: 4

Max nTPM: 83.8
Min nTPM: 67.1
Sample A Male 83.8
Sample B Male 69.0
Sample C Female 67.1
Sample D Female 80.3
Ventral forebrain
nTPM: 144.6
Samples: 4

Max nTPM: 155.1
Min nTPM: 135.6
Sample A Male 155.1
Sample B Male 135.6
Sample C Female 142.1
Sample D Female 145.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.8
71280790 Antisense, RP_050818_01_F02, Mouse strain C57BL/6J (56 days, male) 10.2
100145385 Antisense, RP_110519_02_F02, Mouse strain C57BL/6J (56 days, male) 5.4
Pallidum
Expression energy: 4.2
71280790 Antisense, RP_050818_01_F02, Mouse strain C57BL/6J (56 days, male) 6.0
100145385 Antisense, RP_110519_02_F02, Mouse strain C57BL/6J (56 days, male) 2.4

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